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The map label for this gene is msgA [H]

Identifier: 29141584

GI number: 29141584

Start: 1196617

End: 1196856

Strand: Reverse

Name: msgA [H]

Synonym: t1113

Alternate gene names: 29141584

Gene position: 1196856-1196617 (Counterclockwise)

Preceding gene: 29141585

Following gene: 29141583

Centisome position: 24.98

GC content: 45.83

Gene sequence:

>240_bases
ATGTTCGTCGAACTCGTTTATGACAAGCGAAATGTTGAAGGTTTGCCAAGCGCACGCGAAATCATCCTCAATGAACTCAC
AAAACGCGTACATCAACTTTTTCCCGATGCGCAAGTGAAAGTTAAGCCAATGCAGGCGAACGCATTAAACAGTGACTGTA
CAAAAACCGAGAAAGAACGGCTGCACCGTATGCTGGAAGAGATGTTTGAAGAGGCTGATATGTGGCTGGTCGCCGAATAA

Upstream 100 bases:

>100_bases
CATCCGCAACGTTAGGATGACAAAACGGCGGCTAAACCTTGACACCGGTTATATACCCAGCTTAAATACTGGTCATCCAA
CCAGTAAAAAGGAAATAGCG

Downstream 100 bases:

>100_bases
CGTCCCCTCCTGCGAAAGCGACATGTCCGATCGAAAACAGCGCCCTGAGGCGCTGTCTGTGACGATATAACGCAAACGCC
ACCACTCAGAACATGTAGCG

Product: virulence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MFVELVYDKRNVEGLPSAREIILNELTKRVHQLFPDAQVKVKPMQANALNSDCTKTEKERLHRMLEEMFEEADMWLVAE

Sequences:

>Translated_79_residues
MFVELVYDKRNVEGLPSAREIILNELTKRVHQLFPDAQVKVKPMQANALNSDCTKTEKERLHRMLEEMFEEADMWLVAE
>Mature_79_residues
MFVELVYDKRNVEGLPSAREIILNELTKRVHQLFPDAQVKVKPMQANALNSDCTKTEKERLHRMLEEMFEEADMWLVAE

Specific function: Affects survival in macrophages [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010391 [H]

Pfam domain/function: PF06183 DinI [H]

EC number: NA

Molecular weight: Translated: 9305; Mature: 9305

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVELVYDKRNVEGLPSAREIILNELTKRVHQLFPDAQVKVKPMQANALNSDCTKTEKER
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHH
LHRMLEEMFEEADMWLVAE
HHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MFVELVYDKRNVEGLPSAREIILNELTKRVHQLFPDAQVKVKPMQANALNSDCTKTEKER
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHH
LHRMLEEMFEEADMWLVAE
HHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]