Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29141581
Identifier: 29141581
GI number: 29141581
Start: 1193795
End: 1194337
Strand: Direct
Name: 29141581
Synonym: t1109
Alternate gene names: NA
Gene position: 1193795-1194337 (Clockwise)
Preceding gene: 29141580
Following gene: 29141588
Centisome position: 24.91
GC content: 45.49
Gene sequence:
>543_bases ATGACTAAAGATGAAATCTTTGCAGCTATCCTTAGTAGAGAAGGCGGTTACGTTGATCACCCTGACGACAGGGGGGGGCC AACGCATTGGGGTATAACCCTGACGACGGCCCGGGCTAATGGCTATATGGGGGATATGCGGAATCTTACCCGTAATCAAG CATTAAAAATCCTTGAGGCAGATTATTGGTATGGTCCACGACTTGATCAGGTTGCCATTATCTCTCACTCTATTGCAGCT GAGCTTTGTGATACTGGTGTGAACATGGGACCCTCAATCCCGATTAAGTACTTCCAGCGTTGGCTTAATGTTTTTAATGA TCAGCAAAAAATTTATCCGGATTTGATAGCAGATGGTCAGATTGGGCCACGGACGCTTTCGGCACTAACATTTTTTCTCT CTCACCGGAGAGATGAGGGCGAAATGATACTTATCCGGGCATTGAATTGTAGTCAGGGACAACGCTATCTGGAGTTAGCT GAAAAGCGCCAGGCGAATGAATCATTTGTTTATGGATGGATAAAGGAACGGGTAAGATTGTAA
Upstream 100 bases:
>100_bases TATAAATGTTTATATACTTCGATAAGTTTTTTATCAGATTCATTGCATTACCAATCATAGCATTCAGGTACGTATTTTAT TAATATTAGAAGGAGTCATT
Downstream 100 bases:
>100_bases TTCCCTTACTTACCACTATAGCGGTTTGTGATGATAGCATATAATGATATATTCACACAGAGAACTGGTGAAAGCCACTA AGTCTCATTATTACTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTKDEIFAAILSREGGYVDHPDDRGGPTHWGITLTTARANGYMGDMRNLTRNQALKILEADYWYGPRLDQVAIISHSIAA ELCDTGVNMGPSIPIKYFQRWLNVFNDQQKIYPDLIADGQIGPRTLSALTFFLSHRRDEGEMILIRALNCSQGQRYLELA EKRQANESFVYGWIKERVRL
Sequences:
>Translated_180_residues MTKDEIFAAILSREGGYVDHPDDRGGPTHWGITLTTARANGYMGDMRNLTRNQALKILEADYWYGPRLDQVAIISHSIAA ELCDTGVNMGPSIPIKYFQRWLNVFNDQQKIYPDLIADGQIGPRTLSALTFFLSHRRDEGEMILIRALNCSQGQRYLELA EKRQANESFVYGWIKERVRL >Mature_179_residues TKDEIFAAILSREGGYVDHPDDRGGPTHWGITLTTARANGYMGDMRNLTRNQALKILEADYWYGPRLDQVAIISHSIAAE LCDTGVNMGPSIPIKYFQRWLNVFNDQQKIYPDLIADGQIGPRTLSALTFFLSHRRDEGEMILIRALNCSQGQRYLELAE KRQANESFVYGWIKERVRL
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20566; Mature: 20434
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDEIFAAILSREGGYVDHPDDRGGPTHWGITLTTARANGYMGDMRNLTRNQALKILEA CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC DYWYGPRLDQVAIISHSIAAELCDTGVNMGPSIPIKYFQRWLNVFNDQQKIYPDLIADGQ CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCHHHHCCCC IGPRTLSALTFFLSHRRDEGEMILIRALNCSQGQRYLELAEKRQANESFVYGWIKERVRL CCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure TKDEIFAAILSREGGYVDHPDDRGGPTHWGITLTTARANGYMGDMRNLTRNQALKILEA CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC DYWYGPRLDQVAIISHSIAAELCDTGVNMGPSIPIKYFQRWLNVFNDQQKIYPDLIADGQ CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCHHHHCCCC IGPRTLSALTFFLSHRRDEGEMILIRALNCSQGQRYLELAEKRQANESFVYGWIKERVRL CCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA