Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is hemK [H]
Identifier: 29141573
GI number: 29141573
Start: 1186199
End: 1187032
Strand: Direct
Name: hemK [H]
Synonym: t1101
Alternate gene names: 29141573
Gene position: 1186199-1187032 (Clockwise)
Preceding gene: 29141572
Following gene: 29141574
Centisome position: 24.75
GC content: 58.75
Gene sequence:
>834_bases ATGGATTTTCAGCACTGGCTACATGAGGCGGTAAACCAGCTCCGGGACAGCGACAGCCCCCGGCGCGACGCCGAGATCCT GCTTGAGTACGTTACGGGCAAGAGGCGGACGTATATCATGGCCTTTGGCGAAACGCCGCTTACCGATGTCCAGCAACAAC AGCTCGCGGAGCTGCTGCAGCGGCGTAAACAGGGCGAACCCATTGCGTACCTGACGGGCTTACGCGAATTTTGGTCGCTG CCGCTCTTCGTTTCTCCCGCCACGCTAATCCCGCGCCCGGATACCGAATGTCTGGTTGAACAGGCGTTGGCGCGATTGCC GGTCAAAACCTGTCGTATTCTGGATTTAGGCACCGGAACCGGCGCGATTGCGCTGGCGCTGGCCTGCGAGCGACCGGATT GCGAGGTGACTGCGGTCGATCGTATGCCTGATGCGGTTGCGCTGGCGATACGCAACGCGGAACATTTGGCTATCCGGAAT GTGCGTATACTGCAAAGTTGTTGGTTCAGCGCACTATCGGGGCAGCAGTTCGACATGATTGTCAGCAATCCGCCCTACAT TGACGCGCAGGACCCGCACCTTAGCGAAGGCGATGTACGCTTTGAACCGCGCTCAGCGTTGGTGGCGGACGAAAACGGTA TGGCGGATCTTACGCATATTATCGATAATGCCCGCCAGATGTTAACGCCCGGCGGCTTCCTGCTGCTGGAACACGGTTGG CGGCAGGGCGAAGCGGTAAGAGCGGCTTTCAGGCGGTCTGGTTACACGGATGTAGAAACGTGTCGTGATTATGGTGGCAA TGAACGCGTGGCCTGCGGGCGTTTTACGCCATGA
Upstream 100 bases:
>100_bases GCCTTGATGAAACGATGGAAGGTAAGCTGGATATGCTGATTGAGCCGATTGTTCAGGAACACCAGGCTGACCTGTTAGCC GCGTTGTCCGAGCAGGAATA
Downstream 100 bases:
>100_bases CAATTGCAATGTTGCTCACGCTTCATCTTATTTGTGTTGCGCTCTCCGTCAGTTTGTTTGTCGCTCGTTACTGGTGGCGC TATTGCGGCCATGCGTTGGC
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: M.StyLTHemKP; Protein-(glutamine-N(5)) MTase hemK; Protein-glutamine N-methyltransferase hemK [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MDFQHWLHEAVNQLRDSDSPRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSL PLFVSPATLIPRPDTECLVEQALARLPVKTCRILDLGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAIRN VRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGDVRFEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGW RQGEAVRAAFRRSGYTDVETCRDYGGNERVACGRFTP
Sequences:
>Translated_277_residues MDFQHWLHEAVNQLRDSDSPRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSL PLFVSPATLIPRPDTECLVEQALARLPVKTCRILDLGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAIRN VRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGDVRFEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGW RQGEAVRAAFRRSGYTDVETCRDYGGNERVACGRFTP >Mature_277_residues MDFQHWLHEAVNQLRDSDSPRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSL PLFVSPATLIPRPDTECLVEQALARLPVKTCRILDLGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAIRN VRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGDVRFEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGW RQGEAVRAAFRRSGYTDVETCRDYGGNERVACGRFTP
Specific function: Methylates the translation termination release factor RF1 on 'Gln-235' and RF2 on 'Gln-252' [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=286, Percent_Identity=31.4685314685315, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1787463, Length=275, Percent_Identity=76.3636363636364, Blast_Score=438, Evalue=1e-124, Organism=Escherichia coli, GI87082085, Length=196, Percent_Identity=37.2448979591837, Blast_Score=109, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6324266, Length=180, Percent_Identity=31.1111111111111, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24582226, Length=208, Percent_Identity=28.3653846153846, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 31064; Mature: 31064
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFQHWLHEAVNQLRDSDSPRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQ CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHH RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALARLPVKTCRILDLGTGT HHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCC GAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAIRNVRILQSCWFSALSGQQFDMI CCEEEEEECCCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE VSNPPYIDAQDPHLSEGDVRFEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGW ECCCCCCCCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCC RQGEAVRAAFRRSGYTDVETCRDYGGNERVACGRFTP CCCHHHHHHHHHCCCCHHHHHHHCCCCCCEECCCCCC >Mature Secondary Structure MDFQHWLHEAVNQLRDSDSPRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQ CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHH RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALARLPVKTCRILDLGTGT HHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCC GAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAIRNVRILQSCWFSALSGQQFDMI CCEEEEEECCCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE VSNPPYIDAQDPHLSEGDVRFEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGW ECCCCCCCCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCC RQGEAVRAAFRRSGYTDVETCRDYGGNERVACGRFTP CCCHHHHHHHHHCCCCHHHHHHHCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609; 2544564 [H]