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The map label for this gene is ycgM [H]

Identifier: 29141540

GI number: 29141540

Start: 1147913

End: 1148572

Strand: Direct

Name: ycgM [H]

Synonym: t1065

Alternate gene names: 29141540

Gene position: 1147913-1148572 (Clockwise)

Preceding gene: 29141539

Following gene: 161486808

Centisome position: 23.95

GC content: 53.18

Gene sequence:

>660_bases
ATGTATCAACATCGTAACTGGCAAGGTGCCTTGCTTGATTACCCGGTAAGTAAGGTGGTCTGCGTGGGCAGTAATTACGC
AAATCACATCAAGGAGATGGGCAGCGCGACGCCGGAAGAACCCGTGCTTTTTATCAAGCCGGAAACCGCATTGTGTGATA
TTCGCCAGCCGCTGGCGATTCCGGCGGATATGGGCGCTGTTCATCATGAAGTTGAGCTTGCCGTGCTGATTGGCGCAACG
CTCCGCCAGGCGACCGAAGATCATGTACGTAAAGCGATAGCCGGTTATGGCGTGGCGCTTGATTTAACCCTGCGCGATAT
TCAAGGGAAAATGAAAAAGGCCGGACAGCCTTGGGAAAAAGCCAAAGGTTTCGATAACGCATGTCCGATTTCAGGCTTCA
TCCCTGTCGCGGCCTTCTGCGGCGATCCGCAAAATACGGTTATCGGACTTAACGTTAATGGCGAGGTTCGCCAGCAAGGG
TCGACCGCGGATATGATTCATCCTATTGTGCCCCTTATCGCCTATATGAGCCGCTATTTTACGCTCAAAGCCGGGGACGT
GGTGCTAACCGGCACGCCGGCAGGCGTGGGGCCATTATTAAGCGGCGATGAGCTGGACATTCGTTTTAATGGCGAAACGT
TGTCTACTCGCGTTCTGTAA

Upstream 100 bases:

>100_bases
AAACAACATCTTTCTTCGGTGGGACAAAATACGTCGCACGCTGACCGTTAAACGGTATTCGGCGCCGCGCCTGAATTCCA
TCATGATCTTAGGGGAAAAT

Downstream 100 bases:

>100_bases
AATCTGCTTGCCGCCTTCAGCGGCGGTAAAACTTGCATCTGCAGGCCAGACTGGTTATAAGGTGCAGCTTTAATGCAATG
GCGGATACTTTAATGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MYQHRNWQGALLDYPVSKVVCVGSNYANHIKEMGSATPEEPVLFIKPETALCDIRQPLAIPADMGAVHHEVELAVLIGAT
LRQATEDHVRKAIAGYGVALDLTLRDIQGKMKKAGQPWEKAKGFDNACPISGFIPVAAFCGDPQNTVIGLNVNGEVRQQG
STADMIHPIVPLIAYMSRYFTLKAGDVVLTGTPAGVGPLLSGDELDIRFNGETLSTRVL

Sequences:

>Translated_219_residues
MYQHRNWQGALLDYPVSKVVCVGSNYANHIKEMGSATPEEPVLFIKPETALCDIRQPLAIPADMGAVHHEVELAVLIGAT
LRQATEDHVRKAIAGYGVALDLTLRDIQGKMKKAGQPWEKAKGFDNACPISGFIPVAAFCGDPQNTVIGLNVNGEVRQQG
STADMIHPIVPLIAYMSRYFTLKAGDVVLTGTPAGVGPLLSGDELDIRFNGETLSTRVL
>Mature_219_residues
MYQHRNWQGALLDYPVSKVVCVGSNYANHIKEMGSATPEEPVLFIKPETALCDIRQPLAIPADMGAVHHEVELAVLIGAT
LRQATEDHVRKAIAGYGVALDLTLRDIQGKMKKAGQPWEKAKGFDNACPISGFIPVAAFCGDPQNTVIGLNVNGEVRQQG
STADMIHPIVPLIAYMSRYFTLKAGDVVLTGTPAGVGPLLSGDELDIRFNGETLSTRVL

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=193, Percent_Identity=45.0777202072539, Blast_Score=181, Evalue=4e-46,
Organism=Homo sapiens, GI215422413, Length=193, Percent_Identity=45.0777202072539, Blast_Score=181, Evalue=4e-46,
Organism=Homo sapiens, GI66348062, Length=193, Percent_Identity=45.0777202072539, Blast_Score=181, Evalue=4e-46,
Organism=Homo sapiens, GI156231349, Length=180, Percent_Identity=39.4444444444444, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI40786394, Length=194, Percent_Identity=36.5979381443299, Blast_Score=122, Evalue=2e-28,
Organism=Escherichia coli, GI1787428, Length=219, Percent_Identity=84.9315068493151, Blast_Score=399, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17557057, Length=191, Percent_Identity=42.4083769633508, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6324161, Length=220, Percent_Identity=35.4545454545455, Blast_Score=145, Evalue=4e-36,
Organism=Drosophila melanogaster, GI28571789, Length=186, Percent_Identity=39.247311827957, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28572127, Length=180, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24663695, Length=189, Percent_Identity=29.6296296296296, Blast_Score=80, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 23592; Mature: 23592

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQHRNWQGALLDYPVSKVVCVGSNYANHIKEMGSATPEEPVLFIKPETALCDIRQPLAI
CCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCC
PADMGAVHHEVELAVLIGATLRQATEDHVRKAIAGYGVALDLTLRDIQGKMKKAGQPWEK
CCCCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCHHH
AKGFDNACPISGFIPVAAFCGDPQNTVIGLNVNGEVRQQGSTADMIHPIVPLIAYMSRYF
HCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHE
TLKAGDVVLTGTPAGVGPLLSGDELDIRFNGETLSTRVL
EEECCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MYQHRNWQGALLDYPVSKVVCVGSNYANHIKEMGSATPEEPVLFIKPETALCDIRQPLAI
CCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCC
PADMGAVHHEVELAVLIGATLRQATEDHVRKAIAGYGVALDLTLRDIQGKMKKAGQPWEK
CCCCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCHHH
AKGFDNACPISGFIPVAAFCGDPQNTVIGLNVNGEVRQQGSTADMIHPIVPLIAYMSRYF
HCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHE
TLKAGDVVLTGTPAGVGPLLSGDELDIRFNGETLSTRVL
EEECCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]