Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is pagO [H]
Identifier: 29141494
GI number: 29141494
Start: 1099214
End: 1100128
Strand: Reverse
Name: pagO [H]
Synonym: t1016
Alternate gene names: 29141494
Gene position: 1100128-1099214 (Counterclockwise)
Preceding gene: 29141495
Following gene: 29141493
Centisome position: 22.96
GC content: 40.98
Gene sequence:
>915_bases ATGCGCAAGGTGTCGATATCTATATTATTCATGCTAGTTTCACTGACCTGGGGGACTACATGGTTGGCTATGCGAATTGC CGTTGAAACTATCCCTCCAGTGTTTGCAACCGGAATGAGGTTTATGTTTGCAGCACCTTTTTTAATCATCATTGCATGGT TAAGAAAAAAAAACCTGTTGTTTCCTCCCGGACAACGATTATTCCAGTTTGTGATTTGCATCTTTTATTTTTCTATTCCT TTCTCACTAATGATTTATGGTGAAACCTATGTCAACTCTGGGCTTGCCGCCATTATCTTTGCGAATATGCCTGTGGCCGT TTTGATAGCATCGGTTTTGTTTCTAAATGAAAAAGCGAAACTAATGCAGATCGCGGGCTTAACTATCGCAATCACTGCAT TGACGGGGATACTTCTTGAAGAAACGAATACAAGTACAGAGAGTCACTGGCAGGGTATCACTGCGCTTATTTCTGCTGTG TTAATCCATGCCATAATATATACACAATGTAAGAAAAGAAGTTGTACTGTCTCTGTTATCACATTTAATGCGCTCCCGTG CCTTTTAGCTGGGTTGATACTTTCTGCGACAGGATGGTTTTTTGAAAGACCACAAGTATCAACCTTCTCAGTACACTCAA TATTAGCTACCCTGTATCTCGGGGCTTTTGCCGGAGTTTTTGGTATCCTGTGCTACTTTGCGCTTCAGCAAAAGGCTAAC GCCTTCCAGGCTTCGCTTGTATTTCTTATCTTTCCGCTGATTGCGGTAAGTCTGGAAGACTATATTTATGGATATGCTAT TTCAACACACTCAATGCTGCTTATTATACCATTAGCTATCGGGATATTTCTTACTCTTGTCGCCAGAAATATCCCTGTAA CCAGCAGATGTCGGGATAATTCATCACAGAAATAA
Upstream 100 bases:
>100_bases ATAGAGAAATTTTTATCTAAACATATAAAAAACACAGTGAAGAAAACGCTACTTTTTTCTAGCTAAAAAGCTAAATTAAT TTTTTTATGGAGAGGATCTT
Downstream 100 bases:
>100_bases TCGATTTATAATAACGCAAATAATTCCTGATGCCTTACTGAGCTCCAGCTAATGCGGGGTGGATAAGCTGGAATACAGAC CCGGTAATACACAGCGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKNLLFPPGQRLFQFVICIFYFSIP FSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAV LIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKAN AFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLAIGIFLTLVARNIPVTSRCRDNSSQK
Sequences:
>Translated_304_residues MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKNLLFPPGQRLFQFVICIFYFSIP FSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAV LIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKAN AFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLAIGIFLTLVARNIPVTSRCRDNSSQK >Mature_304_residues MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKNLLFPPGQRLFQFVICIFYFSIP FSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAV LIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKAN AFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLAIGIFLTLVARNIPVTSRCRDNSSQK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33592; Mature: 33592
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKNLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPPGQRLFQFVICIFYFSIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAK CCCHHHHHHHHHHHHHHHCCHHEEEEEHHHHHCCHHEEHCCCCCHHHHHHHHHHHCCHHH LMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVI HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKAN EHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLAIGIFLTLVARNIPVTSRCRDN HHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SSQK CCCC >Mature Secondary Structure MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKNLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPPGQRLFQFVICIFYFSIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAK CCCHHHHHHHHHHHHHHHCCHHEEEEEHHHHHCCHHEEHCCCCCHHHHHHHHHHHCCHHH LMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVI HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKAN EHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLAIGIFLTLVARNIPVTSRCRDN HHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SSQK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9712687; 11677609 [H]