Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is pykA [H]
Identifier: 29141470
GI number: 29141470
Start: 1076922
End: 1078364
Strand: Reverse
Name: pykA [H]
Synonym: t0989
Alternate gene names: 29141470
Gene position: 1078364-1076922 (Counterclockwise)
Preceding gene: 29141471
Following gene: 29141466
Centisome position: 22.5
GC content: 54.68
Gene sequence:
>1443_bases ATGTCCAGAAGGCTTCGCAGAACCAAAATCGTTACCACGTTAGGCCCGGCAACTGACCGCGATAACAACCTTGAGAAGGT TATCGCCGCGGGCGCAAACGTAGTACGTATGAACTTCTCTCACGGCTCGCCGGAAGATCATAAAATGCGTGCTGATAAAG TCCGTGAGATTGCCGCCAAATTGGGGCGTCATGTGGCTATTTTAGGCGACCTGCAAGGGCCAAAAATTCGCGTTTCCACT TTTAAAGAAGGCAAAGTGTTCCTCAATATCGGGGACAAATTTCTGTTAGACGCTAACCTGGGTAAAGGCGAAGGCGATAA AGAAAAAGTCGGCATTGATTACAAAGGGTTGCCGGCAGACGTCGTTCCTGGCGATATCCTGCTGCTTGACGATGGTCGAG TGCAGTTGAAAGTGCTTGAAGTCCAGGGCATGAAAGTCTTTACCGAGGTCACCGTCGGCGGCCCGCTGTCTAACAATAAA GGCATTAACAAGCTCGGCGGCGGGCTTTCTGCTGAAGCGCTGACCGAAAAAGATAAAGCCGATATTCAAACCGCTGCGCT GATAGGCGTTGACTATCTGGCAGTCTCCTTCCCGCGCTGCGGCGAAGATCTGAACTATGCACGCCGCCTGGCGCGCGACG CCGGCTGTGACGCGAAAATTGTGGCTAAAGTCGAACGCGCCGAAGCGGTATGCGATCAAAACGCTATGGACGATATCATT CTGGCCTCTGACGTTGTGATGGTCGCACGTGGCAACCTGGGCGTTGAAATCGGCGATCCGGAGCTGGTTGGTATCCAGAA GGCGCTGATTCGCCGTGCGCGTCAGCTAAACCGCGCAGTCATCACCGCAACGCAGATGATGGAGTCGATGATCACCAACC CGATGCCGACCCGTGCGGAAGTGATGGACGTGGCGAACGCCGTCCTGGATGGCACGGATGCAGTTATGCTGTCTGCCGAA ACCGCAGCCGGTCAGTATCCTTCTGAAACCGTTGCCGCAATGGCGCGCGTCTGTCTGGGCGCAGAAAAAATCCCCAGCAT CAATGTGTCTAAACACCGTCTCGACGTGCAGTTCGACAATGTTGAAGAAGCCATTGCCATGTCTGCGATGTATGCGGCAA ACCATCTGAAAGGCGTTACCGCGATCATCACCATGACGGAATCCGGTCGTACCGCGCTAATGACTTCCCGTATCAGCTCC GGCCTGCCGATTTTCGCCATGTCGCGCCATGAACGCACGCTGAACCTGACCGCGCTCTACCGCGGAGTAACGCCGGTGCA TTTTGATAGCGCGGCTGATGGCGTTGTCGCGGCGCATGAAGCTGTTAATCTGCTGCGCGATAAAGGGTATCTGGTTTCCG GTGACCTGGTTATCGTGACCCAGGGCGATGTCATGAGCACCGTCGGTTCAACCAATACCACGCGTATTTTGACCGTTGAG TAA
Upstream 100 bases:
>100_bases TTTCGTCATCCGGGGACGTTCATTTTATACCGTTAAGGTTTCAGAACGACCGGATCAATGTTCACGCAACACCAAGTTGT TTTAGTCAACGGAGTATTAC
Downstream 100 bases:
>100_bases AGCTCCCCCTGGCCTGCTCATCAGGTAATACAGGGTTTGTCAGCATAAAGCCTCTCTTACGAGAGGCTTTATTTATTTGA TGGGATAAAGATCTTTACGC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK GINKLGGGLSAEALTEKDKADIQTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCDQNAMDDII LASDVVMVARGNLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISS GLPIFAMSRHERTLNLTALYRGVTPVHFDSAADGVVAAHEAVNLLRDKGYLVSGDLVIVTQGDVMSTVGSTNTTRILTVE
Sequences:
>Translated_480_residues MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK GINKLGGGLSAEALTEKDKADIQTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCDQNAMDDII LASDVVMVARGNLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISS GLPIFAMSRHERTLNLTALYRGVTPVHFDSAADGVVAAHEAVNLLRDKGYLVSGDLVIVTQGDVMSTVGSTNTTRILTVE >Mature_479_residues SRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTF KEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKG INKLGGGLSAEALTEKDKADIQTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCDQNAMDDIIL ASDVVMVARGNLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAET AAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSG LPIFAMSRHERTLNLTALYRGVTPVHFDSAADGVVAAHEAVNLLRDKGYLVSGDLVIVTQGDVMSTVGSTNTTRILTVE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=502, Percent_Identity=36.6533864541833, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI33286420, Length=502, Percent_Identity=36.6533864541833, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=36.7676767676768, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI10835121, Length=494, Percent_Identity=35.0202429149798, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI32967597, Length=494, Percent_Identity=35.0202429149798, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=35.1724137931034, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=35.1724137931034, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI310128736, Length=239, Percent_Identity=33.4728033472803, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI310128734, Length=239, Percent_Identity=33.4728033472803, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=33.0232558139535, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=98.3333333333333, Blast_Score=954, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=487, Percent_Identity=36.7556468172485, Blast_Score=278, Evalue=8e-76, Organism=Caenorhabditis elegans, GI17544584, Length=489, Percent_Identity=36.1963190184049, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17506829, Length=494, Percent_Identity=37.8542510121458, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17506831, Length=494, Percent_Identity=37.8542510121458, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71984406, Length=494, Percent_Identity=37.8542510121458, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71984413, Length=494, Percent_Identity=37.8542510121458, Blast_Score=243, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6319279, Length=490, Percent_Identity=35.9183673469388, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6324923, Length=499, Percent_Identity=34.6693386773547, Blast_Score=247, Evalue=3e-66, Organism=Drosophila melanogaster, GI24648964, Length=494, Percent_Identity=37.246963562753, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI28571814, Length=494, Percent_Identity=37.246963562753, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24648966, Length=418, Percent_Identity=35.6459330143541, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24581235, Length=491, Percent_Identity=31.9755600814664, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24646914, Length=272, Percent_Identity=36.0294117647059, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51387; Mature: 51256
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAK CCCCCCHHEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPAD HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCCC VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCHHH DIQTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCDQNAMDDII HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEE LASDVVMVARGNLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE ECCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY HHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHCCCCCEEEECCCCCEEEEEEEE RGVTPVHFDSAADGVVAAHEAVNLLRDKGYLVSGDLVIVTQGDVMSTVGSTNTTRILTVE CCCCCEEECCCCCCHHHHHHHHHHHHHCCEEEECCEEEEECCCHHHHCCCCCCEEEEEEC >Mature Secondary Structure SRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAK CCCCCHHEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPAD HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCCC VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCHHHHCCCHHH DIQTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCDQNAMDDII HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEE LASDVVMVARGNLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE ECCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN HHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECC VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY HHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHCCCCCEEEECCCCCEEEEEEEE RGVTPVHFDSAADGVVAAHEAVNLLRDKGYLVSGDLVIVTQGDVMSTVGSTNTTRILTVE CCCCCEEECCCCCCHHHHHHHHHHHHHCCEEEECCEEEEECCCHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]