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The map label for this gene is cmoB [H]

Identifier: 29141452

GI number: 29141452

Start: 1060733

End: 1061704

Strand: Reverse

Name: cmoB [H]

Synonym: t0971

Alternate gene names: 29141452

Gene position: 1061704-1060733 (Counterclockwise)

Preceding gene: 29141453

Following gene: 29141449

Centisome position: 22.16

GC content: 54.84

Gene sequence:

>972_bases
ATGATCGAGTTTGGTAACTTTTATCAGCTCATTGCTAAAAATCATCTCTCCCACTGGCTGGAAACATTGCCCGCGCAGAT
TGCCGCCTGGCAACGCGAGCAGCAGCATGGCTTGTTTAAACAGTGGTCGAACGCGGTAGAATTTTTACCGGAAATTACGC
CCTGGCGGCTGGATTTACTGCACAGCGTCACGGCGGAAAGCGAAACGCCGCTCAGCGAAGGTCAGCTAAAGCGTATTGAT
ACATTGCTGCGTAATCTGATGCCGTGGCGTAAAGGCCCGTTCTCGCTTTATGGCGTAGATATTGATACCGAATGGCGCTC
AGACTGGAAGTGGGATCGCGTACTGCCGCATCTGTCAGATTTAACCGGCCGGACGATCCTTGATGTCGGCTGCGGCAGCG
GCTATCACCTGTGGCGGATGATTGGCGCGGGCGCACATCTGGCGGTCGGCATCGATCCTACACAGCTTTTCCTCTGCCAA
TTTGAGGCGGTGCGTAAACTGTTGGGTAACGATCAGCGCGCGCATCTGCTGCCGTTGGGCATTGAACAACTCCCGGCGCT
GAAAGCATTTGATACCGTCTTTTCAATGGGGGTGCTTTATCACCGTCGCTCGCCGCTGGAGCATCTGTGGCAATTAAAAG
ATCAGTTGGTCAACGAGGGTGAGCTGGTACTGGAAACGCTGGTCGTCGACGGCGACGAAAATACCGTACTGGTGCCGGGT
GACCGCTACGCGCAGATGCGTAACGTCTATTTTATTCCTTCCGCGCCGGCATTAAAAAAATGGCTGGAAAAATGCGGCTT
TGTTGATGTGCGTATCGCTGACGTTTGCGTCACTACCACCGAAGAGCAGCGCCGTACCGAATGGATGGTTACCGAGTCGC
TGGCCGATTTTCTTGACCCGAACGATCGCAGCAAGACGGTGGAAGGCTATCCCGCCCCGCAGCGCGCGGTGCTGATTGCG
CGTAAACCGTGA

Upstream 100 bases:

>100_bases
ATAAAGCGCGCCTGCGTCAGGCGGGTTTCGAACACAGCGAACTGTGGTTCCAGTGCTTTAACTTCGGGTCGCTTGTCGCG
TTAAAAGCCGGAGTTGCCGC

Downstream 100 bases:

>100_bases
TGGATTGCCGAATGACCGTTACGTATAGCACCGTTTCTCCAAAATAGTTCAAGTTGCAGCAAGGCGGCAACGCAGCAAAT
CCCCGGGAACGTAGGTAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQREQQHGLFKQWSNAVEFLPEITPWRLDLLHSVTAESETPLSEGQLKRID
TLLRNLMPWRKGPFSLYGVDIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHLWRMIGAGAHLAVGIDPTQLFLCQ
FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVVDGDENTVLVPG
DRYAQMRNVYFIPSAPALKKWLEKCGFVDVRIADVCVTTTEEQRRTEWMVTESLADFLDPNDRSKTVEGYPAPQRAVLIA
RKP

Sequences:

>Translated_323_residues
MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQREQQHGLFKQWSNAVEFLPEITPWRLDLLHSVTAESETPLSEGQLKRID
TLLRNLMPWRKGPFSLYGVDIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHLWRMIGAGAHLAVGIDPTQLFLCQ
FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVVDGDENTVLVPG
DRYAQMRNVYFIPSAPALKKWLEKCGFVDVRIADVCVTTTEEQRRTEWMVTESLADFLDPNDRSKTVEGYPAPQRAVLIA
RKP
>Mature_323_residues
MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQREQQHGLFKQWSNAVEFLPEITPWRLDLLHSVTAESETPLSEGQLKRID
TLLRNLMPWRKGPFSLYGVDIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHLWRMIGAGAHLAVGIDPTQLFLCQ
FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVVDGDENTVLVPG
DRYAQMRNVYFIPSAPALKKWLEKCGFVDVRIADVCVTTTEEQRRTEWMVTESLADFLDPNDRSKTVEGYPAPQRAVLIA
RKP

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

Organism=Escherichia coli, GI1788178, Length=323, Percent_Identity=93.1888544891641, Blast_Score=628, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 37049; Mature: 37049

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQREQQHGLFKQWSNAVEFLPEITPWRLDLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHH
HSVTAESETPLSEGQLKRIDTLLRNLMPWRKGPFSLYGVDIDTEWRSDWKWDRVLPHLSD
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
LTGRTILDVGCGSGYHLWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVVDGDENTVLVPG
HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECC
DRYAQMRNVYFIPSAPALKKWLEKCGFVDVRIADVCVTTTEEQRRTEWMVTESLADFLDP
HHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEEHEEEECCHHHHHHHHHHHHHHHHHCCC
NDRSKTVEGYPAPQRAVLIARKP
CCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQREQQHGLFKQWSNAVEFLPEITPWRLDLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHH
HSVTAESETPLSEGQLKRIDTLLRNLMPWRKGPFSLYGVDIDTEWRSDWKWDRVLPHLSD
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
LTGRTILDVGCGSGYHLWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVVDGDENTVLVPG
HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECC
DRYAQMRNVYFIPSAPALKKWLEKCGFVDVRIADVCVTTTEEQRRTEWMVTESLADFLDP
HHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEEHEEEECCHHHHHHHHHHHHHHHHHCCC
NDRSKTVEGYPAPQRAVLIARKP
CCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA