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The map label for this gene is fliD [H]

Identifier: 29141404

GI number: 29141404

Start: 1012128

End: 1013531

Strand: Reverse

Name: fliD [H]

Synonym: t0917

Alternate gene names: 29141404

Gene position: 1013531-1012128 (Counterclockwise)

Preceding gene: 29141413

Following gene: 29141403

Centisome position: 21.15

GC content: 49.5

Gene sequence:

>1404_bases
ATGGCTTCAATTTCATCATTAGGTGTGGGATCAAACTTACCGTTAGACCAGTTGTTGACAGACCTGACAAAGAACGAAAA
AGGACGCTTAACGCCAATTACCAAACAGCAGAGCGCGAATTCGGCAAAGCTAACCGCCTATGGCACATTGAAAAGCGCAT
TAGAAAAATTCCAGACGGCAAATACCGCGTTAAATAAAGCGGATTTATTTAAGTCTACCGTGGCGTCCAGCACGACAGAG
GACCTCAAAGTCAGTACTACCGCAGGCGCTGCCGCAGGGACTTATAAGATTAGCGTAACCCAGCTTGCCGCCGCGCAGTC
GCTGGCGACAAAAACCACCTTCGCAACCACCAAAGAGCAGTTGGGCGATACGTCGGTCACATCCCGGACAATTAAAATTG
AACAGCCGGGACGTAAAGAGCCGCTGGAAATTAAGCTGGATAAAGGCGACACCTCCATGGAGGCGATCCGTGACGCCATT
AATGACGCCGACAGCGGTATCGCCGCCAGTATCGTTAAGGTCAAAGAGAACGAATTCCAGTTGGTGCTTACCGCCAATAG
CGGTACCGACAATACGATGAAGATCACGGTGGAAGGCGATACAAAACTTAACGATCTACTCGCTTATGACAGCACCACCA
ATACCGGCAATATGCAAGAGCTGGTGAAAGCAGAAAACGCGAAGCTGAACGTAAACGGCATCGACATTGAGCGTCAGAGC
AATACCGTAACCGACGCCCCTCAGGGAATTACACTCACCCTGACCAAGAAAGTGACCGACGCGACCGTGACGGTGACGAA
AGATGATACCAAGGCGAAAGAGGCGATTAAATCCTGGGTGGATGCCTATAACTCGCTGGTGGATACTTTTAGCTCATTAA
CTAAATATACCGCCGTTGAGCCGGGCGAAGAAGCCAGCGATAAAAACGGCGCGCTGTTAGGCGATAGTGTGGTTCGTGCT
ATCCAGACCGGGATTCGGGCACAATTTGCCAATAGCGGCAGTAATTCTGCGTTCAAAACAATGGCGGAAATTGGCATCAC
CCAGGATGGGACTTCCGGCAAACTGAAGATTGACGATGATAAGCTGACCAAGGTACTGAAAGATAACACGGCCGCAGCGC
GTGAGCTGCTGGTAGGCGATGGTAAAGAAACGGGTATCACCACCAAAATTGCCACCGAAGTGAAAAGTTATCTGGCGGAT
GACGGCATTATTGATAATGCGCAGGACAACGTTAACGCCACGCTGAAAAGCCTGACAAAACAGTACCTGTCCGTTAGCAA
CAGCATCGATGAAACCGTTGCCCGTTACAAGGCCCAGTTTACCCAACTGGATACCATGATGAGTAAGCTGAATAACACCA
GTAGTTATTTGACCCAGCAATTTACAGCTATGAACAAGTCCTGA

Upstream 100 bases:

>100_bases
ATTATTCCGCGCATTATTTTTGCAAAATTATCATTAAACTTTGCCTCCAGATTGCCGATAACGCGCTTAACTACTGTTTG
CAATCAAAAAGGAAGAAGGC

Downstream 100 bases:

>100_bases
TAACAGAGGTCACCATGTACACCGCGAGCGGTATCAAAGCTTATGCGCAAGTCAGCGTGGAAAGCGCCGTGATGAGCGCC
AGCCCGCATCAGTTGATTGA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTANTALNKADLFKSTVASSTTE
DLKVSTTAGAAAGTYKISVTQLAAAQSLATKTTFATTKEQLGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAI
NDADSGIAASIVKVKENEFQLVLTANSGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQS
NTVTDAPQGITLTLTKKVTDATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTAVEPGEEASDKNGALLGDSVVRA
IQTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKIDDDKLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLAD
DGIIDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTAMNKS

Sequences:

>Translated_467_residues
MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTANTALNKADLFKSTVASSTTE
DLKVSTTAGAAAGTYKISVTQLAAAQSLATKTTFATTKEQLGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAI
NDADSGIAASIVKVKENEFQLVLTANSGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQS
NTVTDAPQGITLTLTKKVTDATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTAVEPGEEASDKNGALLGDSVVRA
IQTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKIDDDKLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLAD
DGIIDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTAMNKS
>Mature_466_residues
ASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTANTALNKADLFKSTVASSTTED
LKVSTTAGAAAGTYKISVTQLAAAQSLATKTTFATTKEQLGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAIN
DADSGIAASIVKVKENEFQLVLTANSGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQSN
TVTDAPQGITLTLTKKVTDATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTAVEPGEEASDKNGALLGDSVVRAI
QTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKIDDDKLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLADD
GIIDNAQDNVNATLKSLTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTAMNKS

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=464, Percent_Identity=51.5086206896552, Blast_Score=414, Evalue=1e-117,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 49778; Mature: 49647

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
NTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKISVTQLAAAQSLATKTTFATTKEQ
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
LGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAINDADSGIAASIVKVKENEFQ
HCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCEE
LVLTANSGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQS
EEEEECCCCCCEEEEEEECCCCHHHHEEECCCCCCCCHHHHHHHCCCEEEECEEEEECCC
NTVTDAPQGITLTLTKKVTDATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTAVE
CCCCCCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGEEASDKNGALLGDSVVRAIQTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKIDDD
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECHH
KLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLADDGIIDNAQDNVNATLKSLTK
HHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
QYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTAMNKS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
NTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKISVTQLAAAQSLATKTTFATTKEQ
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
LGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAINDADSGIAASIVKVKENEFQ
HCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCEE
LVLTANSGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQS
EEEEECCCCCCEEEEEEECCCCHHHHEEECCCCCCCCHHHHHHHCCCEEEECEEEEECCC
NTVTDAPQGITLTLTKKVTDATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTAVE
CCCCCCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGEEASDKNGALLGDSVVRAIQTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKIDDD
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECHH
KLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLADDGIIDNAQDNVNATLKSLTK
HHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
QYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTAMNKS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2193164; 11677609; 1527488; 9878359; 11118149 [H]