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The map label for this gene is yedD

Identifier: 29141400

GI number: 29141400

Start: 1009329

End: 1009742

Strand: Direct

Name: yedD

Synonym: t0913

Alternate gene names: 29141400

Gene position: 1009329-1009742 (Clockwise)

Preceding gene: 29141396

Following gene: 29141405

Centisome position: 21.06

GC content: 58.21

Gene sequence:

>414_bases
ATGAAAAAAGTAGCGATCGTTGGCGCATTGCTGGTTCTGGCCGGATGCGCCGAGGTGGAAAACTATAATGATGTGGTGAA
AACGCCCGCGCCGGCCGGTCTGGAAGGGTACTGGCAGTCAAAAGGCCCGCAACGTAAGCTGGTGAGCCCTGAAGCTATCG
CCAGCCTGGTGGTGACTAAAGAAGGCGATACGCTGGACTGCCGCCAGTGGCAGCGCGTTATTGCTCTGCCGGGCAAGCTG
ACCATGCTCTCCGATGACTTAACCAATGTTACGGTTAAGCGTGAGCTCTATGAGATTGAGCGCGACGGGAATACCCTGGA
ATATGATGGCATGACGCTGCAACGGGTCGCTCGTCCGACGCCGGAGTGCGCCGCCGCGTTAGAAAAAACGCCGCTGCCGA
CGCCGCTGCCGTAA

Upstream 100 bases:

>100_bases
TGCCACAATTCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTT
CTTCTGATGCAGGATGAATG

Downstream 100 bases:

>100_bases
TTTCGCTTCCCGGCAGCGCTCTGCCGCCGGGAACGCTCATCACACGTCCTCAATGACCCACACGCTGACGCTGCCTGCGT
TGCAGAAGAACGTCGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKKVAIVGALLVLAGCAEVENYNDVVKTPAPAGLEGYWQSKGPQRKLVSPEAIASLVVTKEGDTLDCRQWQRVIALPGKL
TMLSDDLTNVTVKRELYEIERDGNTLEYDGMTLQRVARPTPECAAALEKTPLPTPLP

Sequences:

>Translated_137_residues
MKKVAIVGALLVLAGCAEVENYNDVVKTPAPAGLEGYWQSKGPQRKLVSPEAIASLVVTKEGDTLDCRQWQRVIALPGKL
TMLSDDLTNVTVKRELYEIERDGNTLEYDGMTLQRVARPTPECAAALEKTPLPTPLP
>Mature_137_residues
MKKVAIVGALLVLAGCAEVENYNDVVKTPAPAGLEGYWQSKGPQRKLVSPEAIASLVVTKEGDTLDCRQWQRVIALPGKL
TMLSDDLTNVTVKRELYEIERDGNTLEYDGMTLQRVARPTPECAAALEKTPLPTPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788237, Length=137, Percent_Identity=83.9416058394161, Blast_Score=216, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEDD_SALTY (Q06399)

Other databases:

- EMBL:   L13280
- EMBL:   AE006468
- RefSeq:   NP_460917.1
- PRIDE:   Q06399
- GeneID:   1253485
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1964
- NMPDR:   fig|99287.1.peg.1898
- HOGENOM:   HBG417359
- OMA:   QRVDRPT
- ProtClustDB:   PRK10397
- BioCyc:   STYP99287:STM1964-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14947; Mature: 14947

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVAIVGALLVLAGCAEVENYNDVVKTPAPAGLEGYWQSKGPQRKLVSPEAIASLVVTK
CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEC
EGDTLDCRQWQRVIALPGKLTMLSDDLTNVTVKRELYEIERDGNTLEYDGMTLQRVARPT
CCCEECHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCC
PECAAALEKTPLPTPLP
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKVAIVGALLVLAGCAEVENYNDVVKTPAPAGLEGYWQSKGPQRKLVSPEAIASLVVTK
CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEC
EGDTLDCRQWQRVIALPGKLTMLSDDLTNVTVKRELYEIERDGNTLEYDGMTLQRVARPT
CCCEECHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCC
PECAAALEKTPLPTPLP
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 11677609