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The map label for this gene is fliH [H]

Identifier: 29141393

GI number: 29141393

Start: 1002973

End: 1003680

Strand: Reverse

Name: fliH [H]

Synonym: t0906

Alternate gene names: 29141393

Gene position: 1003680-1002973 (Counterclockwise)

Preceding gene: 29141394

Following gene: 29141392

Centisome position: 20.95

GC content: 60.73

Gene sequence:

>708_bases
ATGTCTAATGAATTGCCGTGGCAAGTCTGGACCCCCGACGATCTCGCTCCGCCGCCGGAGACGTTTGTGCCGGTTGAGGC
TGATAACGTTACCTTGACAGACGATACGCCGGAGCCCGAACTCACTGCCGAACAGCAGCTGGAGCAGGAGCTGGCGCAGC
TAAAAATACAGGCCCATGAACAAGGTTATAACGCCGGGCTGGCGGAGGGACGGCAAAAAGGACACGCGCAGGGATACCAG
GAAGGGTTAGCGCAAGGGCTGGAGCAAGGACAAGCCCAGGCGCAGACGCAGCAGGCGCCGATTCATGCCCGTATGCAGCA
GTTAGTGAGCGAGTTTCAGAACACGCTTGACGCGCTCGATAGCGTTATCGCCTCACGGCTGATGCAAATGGCCCTGGAGG
CCGCACGTCAGGTCATCGGCCAAACGCCGGCGGTGGACAACTCAGCGCTGATTAAACAGATCCAACAACTGTTGCAGCAA
GAGCCGCTCTTTAGCGGCAAGCCGCAGTTGCGCGTGCATCCGGACGACTTACAGCGGGTGGAAGAGATGCTGGGCGCCAC
GCTCAGTCTTCACGGATGGCGGTTGCGCGGCGATCCAACGTTGCATCACGGCGGGTGTAAAGTCTCTGCCGATGAGGGCG
ATCTGGACGCCAGCGTCGCCACTCGCTGGCAAGAGTTGTGTCGCCTGGCGGCGCCGGGAGTGCTCTGA

Upstream 100 bases:

>100_bases
CGTCTGTCTCAGGTGGAAAACGAGCAGAAAGCGATTCTGCTTATTGTGCGTCGTCTGGCGGAAACCGGCGAAATGGTGAT
TGGCAGCGGCGAGGATACCT

Downstream 100 bases:

>100_bases
TGACCACGCGCCTGACCCGCTGGCTTACCGCGCTCGACAACTTTGAAGCAAAAATGGCGTTATTGCCGGCGGTGCGCCGT
TATGGACGTTTAACCCGCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTDDTPEPELTAEQQLEQELAQLKIQAHEQGYNAGLAEGRQKGHAQGYQ
EGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQ
EPLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL

Sequences:

>Translated_235_residues
MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTDDTPEPELTAEQQLEQELAQLKIQAHEQGYNAGLAEGRQKGHAQGYQ
EGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQ
EPLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL
>Mature_234_residues
SNELPWQVWTPDDLAPPPETFVPVEADNVTLTDDTPEPELTAEQQLEQELAQLKIQAHEQGYNAGLAEGRQKGHAQGYQE
GLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQE
PLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=235, Percent_Identity=81.7021276595745, Blast_Score=344, Evalue=3e-96,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 25797; Mature: 25666

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTDDTPEPELTAEQQLEQELAQLKIQAHE
CCCCCCCEEECCCCCCCCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
QGYNAGLAEGRQKGHAQGYQEGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHH
EEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL
HHHHCCHHHHCCEEECCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNELPWQVWTPDDLAPPPETFVPVEADNVTLTDDTPEPELTAEQQLEQELAQLKIQAHE
CCCCCCEEECCCCCCCCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
QGYNAGLAEGRQKGHAQGYQEGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHH
EEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL
HHHHCCHHHHCCEEECCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1646201; 11677609; 2656645 [H]