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The map label for this gene is yedJ [H]

Identifier: 29141373

GI number: 29141373

Start: 986351

End: 987046

Strand: Direct

Name: yedJ [H]

Synonym: t0885

Alternate gene names: 29141373

Gene position: 986351-987046 (Clockwise)

Preceding gene: 29141372

Following gene: 29141374

Centisome position: 20.58

GC content: 54.89

Gene sequence:

>696_bases
ATGGACTCAGGATACTGGCAATCGCAGTTTGAAGACTGGCTACGTCACCACCACCAGGAACAGGATGCCGCCCATGACAT
CTTCCATTTTCGTCGTGTTTGGGCAACCGCGCAAACGCTCGGGGAAAACAGTCCTGTCGACTGGCTGGTGGTGCTATCGG
CATGTTATTTCCATGACATCGTCAGCCTGGCGAAAAATCATCCGCAGCGGCATCGTTCTTCCATTCTGGCGGCGGCAGAA
ACCCGGCGTATTTTTCTGCGGGATTTTCCTGACTTTCCGGCAGAAAAACTGGCGGGCATTTGTCATGCTATCGAAGCGCA
TAGCTTCAGCGCAAAAATTGCGCCTACCACGCCAGAGGCAAAAATCGTACAGGATGCAGACAGGCTGGAGGCGTTGGGCG
CCATTGGTCTGGCGCGGGTCTTCGCGGTCTCCGGCGCGCTGGGCGTCGCGCTGTTTGATGCCGACGATCCCTTTGCCAAC
AGACGGCCTCTTAACGATAAGCAATTCGCGCTCGACCATTTTAAAACCAAACTGCTGAAACTGCCGCTGACGATGCAGAC
CGAACGGGGCAAGCACCTGGCGCAGCGTAATGCGGATTTTCTGGTGTCGTACATGGCGAAACTGAGCGCTGAGCTGAAAG
GCGACTATGAAACACGGGATGATGCGGTCATCCAGATGTTTGCTACGTATCAGTAA

Upstream 100 bases:

>100_bases
CGCAAGCACGCAAGGATGTAAAGTGGTGGCGGATATGTCAGGATAGCGAACCCTGTGCTCAGGCATGTAATAAAAATGGT
CTGCTATAAAGAGAGGGCGT

Downstream 100 bases:

>100_bases
CCCCTGCCGCTGAAACGTAAACCGCGTCATTTTATGTTAGTCTGTCGGCAATTATTTTTGGCCGGTTAAATGTATGCAGG
AAAATATTTCAGTAACACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDIVSLAKNHPQRHRSSILAAAE
TRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFAN
RRPLNDKQFALDHFKTKLLKLPLTMQTERGKHLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATYQ

Sequences:

>Translated_231_residues
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDIVSLAKNHPQRHRSSILAAAE
TRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFAN
RRPLNDKQFALDHFKTKLLKLPLTMQTERGKHLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATYQ
>Mature_231_residues
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDIVSLAKNHPQRHRSSILAAAE
TRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFAN
RRPLNDKQFALDHFKTKLLKLPLTMQTERGKHLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATYQ

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=229, Percent_Identity=72.9257641921397, Blast_Score=345, Evalue=2e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26174; Mature: 26174

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSLAKNHPQRHRSSILAAAETRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFANRRPLNDKQFALDHFKTKLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
LPLTMQTERGKHLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATYQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSLAKNHPQRHRSSILAAAETRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFANRRPLNDKQFALDHFKTKLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
LPLTMQTERGKHLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATYQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]