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The map label for this gene is erfK [H]

Identifier: 29141352

GI number: 29141352

Start: 949972

End: 950901

Strand: Direct

Name: erfK [H]

Synonym: t0859

Alternate gene names: 29141352

Gene position: 949972-950901 (Clockwise)

Preceding gene: 29141351

Following gene: 29141353

Centisome position: 19.82

GC content: 52.04

Gene sequence:

>930_bases
ATGCGTCGTATCACACCTTTTTTTCCGTTTTTCGTCTTGTTGGTAAGCCATTTCTCGCTGGCTATAAGCTATCCGTTGCC
GCCCGAAGGCAGTCGTCTGGTAGGACAGCCTGTCACAATCGCCGTACCTCAGAACAATACTCAGCCCTTAGAGTCATTTG
CCGCCCGCTATGGTCAGGGGTTGAGTAATATGCTTGAAGCGAATCCCGGCGTGGATGTGTTTTTACCTCAGTCTGGTTCC
ACACTGGTAGTGCCGCAGCAGTTGATTCTGCCTGACACCGTTCGTGAAGGTATTGTGGTAAACGTCGCCGAGATGCGCCT
TTATTATTATCCCGCAGGCACGAATACGGTTGAGGTACTACCCATTGGTATTGGTCAGGCTGGCCGTGAAACGCCGCGCA
ACTGGGTAACTGCGGTTGAACGCAAACAAGATGGCCCGGTTTGGGTGCCAACGGCTAATACGCGTCGGGAATATGCTAAA
GAGGGAAAAACGCTGCCCGCGATGGTGCCTGCGGGGCCGGATAACCCTATGGGGCTATACGCAATATATATCGGCAGGTT
ATATGCCACCCATGGCACTAACGCTAACTTTGGCATTGGCCTTCGCGTCAGTCAGGGCTGTATCCGTTTACGCAATGACG
ATATTAAATATTTATTCGACCATGTTCCTGTAGGAACCCGCGTTCAGATTATCGACAGGCCCGTTAAATTTTCGGTAGAG
CCGGATGGCAGTCGTTGGCTGGAGGTACACGAACCGCTTTCTCGCAACCGTGCTGAATTTGAGTCAGACAAAAAAGTTCC
ATTGCCCGTTACGCCAGTGCTGCGCACGTTTATCAAAGGGGATGACGTTGATACTTCGCGGGTTAATGAGGTGCTGGAGC
GCCGTTCCGGAATGCCGGTCAACATTAGCGCAGGCAGGTCTGGCCTTTAA

Upstream 100 bases:

>100_bases
AGGGGAACGCAAACGCAACATAACCCGGGCGCACAACACCAGCCATGTGAGAAAAAAGCTATACTTAACGCACACCTGCC
GCGACAAAGGAAGGGATATA

Downstream 100 bases:

>100_bases
ATATCCTGCCACATTGCTGGTTTTCATGGGCTGGAACATCTGTATTAGTAGTGAGTGTCATGGCAGGGGCTTCATTTTCT
CAACGAACCGCGAGGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRSGL

Sequences:

>Translated_309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRSGL
>Mature_309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYATHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRSGL

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=305, Percent_Identity=79.344262295082, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1787040, Length=294, Percent_Identity=64.2857142857143, Blast_Score=397, Evalue=1e-112,
Organism=Escherichia coli, GI1787356, Length=285, Percent_Identity=49.8245614035088, Blast_Score=273, Evalue=7e-75,
Organism=Escherichia coli, GI1787968, Length=290, Percent_Identity=45.8620689655172, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 34159; Mature: 34159

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQG
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL
HHHHHHCCCCCEEEECCCCCEEECCHHHHCCHHHHCCEEEEEEEEEEEEEECCCCEEEEE
PIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYATHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
EEEEEHHEEECCCCCCEEEEEEECCCEEEECCCCHHHHHHHCCCCCEEEEEECCEEEEEC
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPV
CCCCCEEEECCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISAGRSGL
EECCCCCCC
>Mature Secondary Structure
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQG
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL
HHHHHHCCCCCEEEECCCCCEEECCHHHHCCHHHHCCEEEEEEEEEEEEEECCCCEEEEE
PIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYATHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
EEEEEHHEEECCCCCCEEEEEEECCCEEEECCCCHHHHHHHCCCCCEEEEEECCEEEEEC
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPV
CCCCCEEEECCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISAGRSGL
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7883701; 11677609 [H]