Click here to switch to the map view.

The map label for this gene is pduJ [H]

Identifier: 29141326

GI number: 29141326

Start: 923834

End: 924109

Strand: Reverse

Name: pduJ [H]

Synonym: t0829

Alternate gene names: 29141326

Gene position: 924109-923834 (Counterclockwise)

Preceding gene: 29141327

Following gene: 29141325

Centisome position: 19.28

GC content: 55.43

Gene sequence:

>276_bases
ATGAATAACGCACTGGGACTGGTTGAAACAAAAGGGTTAGTAGGCGCCATTGAAGCTGCCGACGCCATGGTTAAATCCGC
CAACGTACAGCTGGTGGGCTACGAAAAAATTGGTTCTGGCCTGGTTACAGTCATGGTTCGCGGCGACGTCGGCGCGGTTA
AAGCAGCCGTAGATGCCGGCAGCGCGGCGGCAAGCGTCGTGGGTGAAGTGAAATCCTGCCACGTTATCCCGCGTCCGCAC
AGCGATGTTGAGGCCATTTTACCGAAATCAGCCTAA

Upstream 100 bases:

>100_bases
GACAGTCAGGCCCAACGCAACACCGGTAATAACGCGGCACGGCTGGTCAAAGGGATCCCTTTCCGGGATCTGAATAGCTA
AGCAACAGGAGAACTGCAGT

Downstream 100 bases:

>100_bases
TCGATGGCGAATAAGGAGCACCGCGTGAAGCAATCACTGGGATTACTTGAAGTTTGTGGTCTGGCACTGGCTATCAGCTG
CGCCGATATCATGGCGAAAT

Product: propanediol utilization protein PduJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPH
SDVEAILPKSA

Sequences:

>Translated_91_residues
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPH
SDVEAILPKSA
>Mature_91_residues
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPH
SDVEAILPKSA

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=86, Percent_Identity=63.953488372093, Blast_Score=97, Evalue=2e-22,
Organism=Escherichia coli, GI87082105, Length=86, Percent_Identity=50, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9068; Mature: 9068

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAG
CCCCCCEEECCCCEEHHHHHHHHHHCCCEEEEEHHHCCCCEEEEEEECCCCCEEEECCCC
SAAASVVGEVKSCHVIPRPHSDVEAILPKSA
CHHHHHHHHHHHCEECCCCCCCHHEECCCCC
>Mature Secondary Structure
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAG
CCCCCCEEECCCCEEHHHHHHHHHHCCCEEEEEHHHCCCCEEEEEEECCCCCEEEECCCC
SAAASVVGEVKSCHVIPRPHSDVEAILPKSA
CHHHHHHHHHHHCEECCCCCCCHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]