| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is pduL
Identifier: 29141324
GI number: 29141324
Start: 922716
End: 923348
Strand: Reverse
Name: pduL
Synonym: t0827
Alternate gene names: NA
Gene position: 923348-922716 (Counterclockwise)
Preceding gene: 29141325
Following gene: 29141323
Centisome position: 19.27
GC content: 58.45
Gene sequence:
>633_bases ATGGATAAAGAGCTTCTGCAATCAACGGTCCGTAAAGTTCTCGACGAGATGCGCCAGCGGCCTATTCCGCTGGGCGTCTC AAACCGTCATATCCACCTGTCCGCGCAGGATTATGAGCGGCTGTTTCCCGGCCATCCCATCAGCGAAAAAAAAGCGCTAC TGCAGCCGGGACAATATGCTACGGAGCAAACCGTCACCCTGGTAGGGCCGAAAGGACAGCTCAAAAATGTGCGCCTGCTC GGCCCGCTGCGCTCGGTAAGCCAGGTAGAAATATCGCGTACCGATGCCAGAACACTGGGGATTGCCGCGCCGCTGAGAAT GTCCGGCAACCTGAAGGGCACACCTGGCATCCGCCTGGTCAGCCCCTTTGGCGAACTGGAGCTACCTTCCGGGGTTATCG TCGCGCAGCGGCATATTCATATGTCGCCGCTTGATGCGCTGATCCTGAAGGTCTCCCACGGCGATAGGGTTTCGGTAGCG ATTGAAGGCGACGAGCGCGGGCTGATTTTCAACAATGTGGCGATTCGCGTTTCACCGGACATGCGCCTCGAAATGCACAT TGATACCGATGAAGCCAACGCCGCTGGTGCCGATAACCCGCAGGCCTTTGCCCGGCTGGTAGGCCCGCGATGA
Upstream 100 bases:
>100_bases AACTGGTCAGCTGCAATCTGTGTCTGGATCCAAAATGTCCGCGCCAGAAGGGCGAACCTCGTACGCTTTGCATTCATTCC GGCAAGCGAGGTGAAGCGTA
Downstream 100 bases:
>100_bases ACGGCGAAACTCTGCAGCGCATTGTCGAGGAGATTGTCTCCCGACTGCAGCGTCGTGCCCTGAGCACGGCAACGCTGAGC GTTGCGCAGCTTCGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Propanediol Utilization; Propanediol/Ethanolamine Utilization Protein; Transcriptional Regulator; Propanediol Utilization Protein-Like; Propanediol Utilization Protein Family
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYATEQTVTLVGPKGQLKNVRLL GPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVA IEGDERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR
Sequences:
>Translated_210_residues MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYATEQTVTLVGPKGQLKNVRLL GPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVA IEGDERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR >Mature_210_residues MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYATEQTVTLVGPKGQLKNVRLL GPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVA IEGDERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR
Specific function: Unknown
COG id: COG4869
COG function: function code Q; Propanediol utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22990; Mature: 22990
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHCCCCCCC TEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLV CCCEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCEEECCCCCCCCCEEEE SPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVAIEGDERGLIFNNVAIRVSPD CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCEEEECEEEEECCC MRLEMHIDTDEANAAGADNPQAFARLVGPR CEEEEEECCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHCCCCCCC TEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLV CCCEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCEEECCCCCCCCCEEEE SPFGELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVAIEGDERGLIFNNVAIRVSPD CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCEEEECEEEEECCC MRLEMHIDTDEANAAGADNPQAFARLVGPR CEEEEEECCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA