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The map label for this gene is rfbS

Identifier: 29141283

GI number: 29141283

Start: 875049

End: 875888

Strand: Direct

Name: rfbS

Synonym: t0783

Alternate gene names: 29141283

Gene position: 875049-875888 (Clockwise)

Preceding gene: 29141282

Following gene: 29141284

Centisome position: 18.26

GC content: 33.21

Gene sequence:

>840_bases
ATGAAAATTCTAATAATGGGAGCGTTTGGGTTCCTTGGATCACGACTTACATCCTACTTCGAAAGTCGACATACTGTGAT
TGGCTTAGCAAGGAAGAGGAACAATGAAGCTACCATAAATAATATTATTTACACGACAGAAAATAATTGGATCGAAAAAA
TACTAGAATTTGAACCGAATATTATTATTAACACTATTGCTTGCTATGGAAGACATAACGAACCTGCAACAGCTTTAATA
GAAAGCAATATTCTTATGCCTATCAGAGTATTAGAATCTATCTCATCACTTGATGCAGTATTCATAAATTGTGGAACATC
ACTGCCACCAAATACGAGTTTATATGCATATACTAAACAAAAAGCAAATGAACTCGCCGCCGCCATTATAGATAAAGTTT
GCGGTAAATATATAGAGTTAAAATTGGAGCATTTCTATGGAGCTTTTGATGGAGACGATAAGTTTACCAGTATGGTTATT
AGACGTTGTTTAAGTAACCAGCCAGTAAAGTTAACATCTGGTTTGCAACAGAGAGATTTCTTGTATATAAAAGATCTACT
AACAGCGTTCGATTGTATTATAAGTAATGTTAATAATTTCCCCAAATTTCATAGTATTGAAGTTGGTAGTGGAGAGGCGA
TATCAATTCGTGAATATGTAGATACTGTTAAAAATATCACAAAAAGCAATTCTATAATTGAATTTGGCGTGGTCAAAGAA
AGAGTAAATGAATTGATGTATAGTTGTGCTGATATAGCAGAACTTGAAAAAATAGGATGGAAAAGAGAGTTCTCTCTTGT
TGATGCATTAACTGAAATAATTGAAGAGGAAGGGAAATGA

Upstream 100 bases:

>100_bases
TTGACTACAGAGCATTTAGATTATGTAGTTAGCAAGTTTGAAGAGTTCTTTGGTTTGAATTTCTAATTTTTGAGGGGGGG
GGATTCCCCTCTATGATTTC

Downstream 100 bases:

>100_bases
AGCTTTTAATTACCGGTGGATGTGGCTTCCTTGGGAGTAATCTTGCCTCCTTTGCTTTAAGTCAAGGGATTGATTTAATT
GTATTCGATAATCTATCACG

Product: paratose synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKILIMGAFGFLGSRLTSYFESRHTVIGLARKRNNEATINNIIYTTENNWIEKILEFEPNIIINTIACYGRHNEPATALI
ESNILMPIRVLESISSLDAVFINCGTSLPPNTSLYAYTKQKANELAAAIIDKVCGKYIELKLEHFYGAFDGDDKFTSMVI
RRCLSNQPVKLTSGLQQRDFLYIKDLLTAFDCIISNVNNFPKFHSIEVGSGEAISIREYVDTVKNITKSNSIIEFGVVKE
RVNELMYSCADIAELEKIGWKREFSLVDALTEIIEEEGK

Sequences:

>Translated_279_residues
MKILIMGAFGFLGSRLTSYFESRHTVIGLARKRNNEATINNIIYTTENNWIEKILEFEPNIIINTIACYGRHNEPATALI
ESNILMPIRVLESISSLDAVFINCGTSLPPNTSLYAYTKQKANELAAAIIDKVCGKYIELKLEHFYGAFDGDDKFTSMVI
RRCLSNQPVKLTSGLQQRDFLYIKDLLTAFDCIISNVNNFPKFHSIEVGSGEAISIREYVDTVKNITKSNSIIEFGVVKE
RVNELMYSCADIAELEKIGWKREFSLVDALTEIIEEEGK
>Mature_279_residues
MKILIMGAFGFLGSRLTSYFESRHTVIGLARKRNNEATINNIIYTTENNWIEKILEFEPNIIINTIACYGRHNEPATALI
ESNILMPIRVLESISSLDAVFINCGTSLPPNTSLYAYTKQKANELAAAIIDKVCGKYIELKLEHFYGAFDGDDKFTSMVI
RRCLSNQPVKLTSGLQQRDFLYIKDLLTAFDCIISNVNNFPKFHSIEVGSGEAISIREYVDTVKNITKSNSIIEFGVVKE
RVNELMYSCADIAELEKIGWKREFSLVDALTEIIEEEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RFBS_SALTI (P14168)

Other databases:

- EMBL:   M29682
- EMBL:   AL627273
- EMBL:   AE014613
- RefSeq:   NP_456638.1
- RefSeq:   NP_804625.1
- ProteinModelPortal:   P14168
- GeneID:   1070042
- GeneID:   1248634
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t0783
- KEGG:   sty:STY2299
- HOGENOM:   HBG362914
- OMA:   IHTATCY
- ProtClustDB:   CLSK2753021
- BioCyc:   MetaCyc:MONOMER-13794
- BioCyc:   SENT209261:T0783-MONOMER
- BioCyc:   SENT220341:STY2299-MONOMER
- InterPro:   IPR001509
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF01370 Epimerase

EC number: NA

Molecular weight: Translated: 31502; Mature: 31502

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: ACT_SITE 115-115

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIMGAFGFLGSRLTSYFESRHTVIGLARKRNNEATINNIIYTTENNWIEKILEFEPN
CEEEEEEHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCC
IIINTIACYGRHNEPATALIESNILMPIRVLESISSLDAVFINCGTSLPPNTSLYAYTKQ
EEEEEHEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEHHH
KANELAAAIIDKVCGKYIELKLEHFYGAFDGDDKFTSMVIRRCLSNQPVKLTSGLQQRDF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEHHCCCCHHHH
LYIKDLLTAFDCIISNVNNFPKFHSIEVGSGEAISIREYVDTVKNITKSNSIIEFGVVKE
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEHHHHHH
RVNELMYSCADIAELEKIGWKREFSLVDALTEIIEEEGK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILIMGAFGFLGSRLTSYFESRHTVIGLARKRNNEATINNIIYTTENNWIEKILEFEPN
CEEEEEEHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCC
IIINTIACYGRHNEPATALIESNILMPIRVLESISSLDAVFINCGTSLPPNTSLYAYTKQ
EEEEEHEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEHHH
KANELAAAIIDKVCGKYIELKLEHFYGAFDGDDKFTSMVIRRCLSNQPVKLTSGLQQRDF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEHHCCCCHHHH
LYIKDLLTAFDCIISNVNNFPKFHSIEVGSGEAISIREYVDTVKNITKSNSIIEFGVVKE
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEHHHHHH
RVNELMYSCADIAELEKIGWKREFSLVDALTEIIEEEGK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2793833; 11677608; 12644504