Click here to switch to the map view.

The map label for this gene is yohJ [C]

Identifier: 29141181

GI number: 29141181

Start: 760034

End: 760432

Strand: Reverse

Name: yohJ [C]

Synonym: t0674

Alternate gene names: 29141181

Gene position: 760432-760034 (Counterclockwise)

Preceding gene: 29141182

Following gene: 29141180

Centisome position: 15.87

GC content: 46.37

Gene sequence:

>399_bases
ATGAGTAAGTCACTGAATATTATCTGGCAATATATACGCGCTTTTGTATTGATTTATGCCTGTTTGTACGCAGGCATTTT
TCTTGCATCACTGCTTCCTATCACTATTCCCGGCAGCATTATCGGGATGTTAATTCTGTTTGTATTGCTGGCGCTGCAAA
TTCTGCCGGCAAAGTGGGTTAACCCCGGCTGTTATGTGCTGATTCGTTATATGGCGTTGCTGTTTGTGCCAATTGGCGTT
GGGGTCATGCAATATTTTGACTTACTGCGCGCGCAATTCGGCCCGGTGGTGGTCTCTTGCGCTATCAGTACGCTGGTCGT
TTTTGTGGTCGTAAGCTGGAGTTCACATCTGATACACGGTGAGCGTAAAGTGGTTGGGCAGAAGGGAACGAAAAAATGA

Upstream 100 bases:

>100_bases
CTGCTGTCTATACCCACTATGCTAAGAATTCATGATGTGATCGGTAGCACGTTTTAACGTTTAATTGTATGATGAATCCA
TCTCATCAAGGGCTTTAAAC

Downstream 100 bases:

>100_bases
TGACATATATCTGGTGGTCGTTACCGCTGACGCTGGCGGTATTTTTCGCCGCCCGCAGACTGGCGGCGCATTTTAAAATG
CCGTTGCTGAATCCGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKSLNIIWQYIRAFVLIYACLYAGIFLASLLPITIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGV
GVMQYFDLLRAQFGPVVVSCAISTLVVFVVVSWSSHLIHGERKVVGQKGTKK

Sequences:

>Translated_132_residues
MSKSLNIIWQYIRAFVLIYACLYAGIFLASLLPITIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGV
GVMQYFDLLRAQFGPVVVSCAISTLVVFVVVSWSSHLIHGERKVVGQKGTKK
>Mature_131_residues
SKSLNIIWQYIRAFVLIYACLYAGIFLASLLPITIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVG
VMQYFDLLRAQFGPVVVSCAISTLVVFVVVSWSSHLIHGERKVVGQKGTKK

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=132, Percent_Identity=91.6666666666667, Blast_Score=249, Evalue=6e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 14614; Mature: 14483

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSLNIIWQYIRAFVLIYACLYAGIFLASLLPITIPGSIIGMLILFVLLALQILPAKWV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
NPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAISTLVVFVVVSWSSHLIHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKVVGQKGTKK
HHHHHCCCCCCC
>Mature Secondary Structure 
SKSLNIIWQYIRAFVLIYACLYAGIFLASLLPITIPGSIIGMLILFVLLALQILPAKWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
NPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAISTLVVFVVVSWSSHLIHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKVVGQKGTKK
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA