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The map label for this gene is cdd [H]

Identifier: 29141179

GI number: 29141179

Start: 758304

End: 759188

Strand: Reverse

Name: cdd [H]

Synonym: t0672

Alternate gene names: 29141179

Gene position: 759188-758304 (Counterclockwise)

Preceding gene: 29141180

Following gene: 29141178

Centisome position: 15.84

GC content: 56.38

Gene sequence:

>885_bases
ATGCATCCACGTTTTCAAACTGCTTTTGCCCAGCTTGCGGATAATTTGCAATCAGCGCTGGCCCCTATCCTGGCGGACCA
CCATTTTCCCGCCATGCTGACCGCAGAGCAGGTCTCGACGCTTAAAAATACGGCGGGACTGGACGAAGACGCGCTGGCTT
TCGCACTGTTACCTCTGGCGGCGGCCTGCGCCCGTACCGATTTGTCCCATTTTAACGTCGGCGCGATTGCGCGCGGCGTT
AGCGGCAACTGGTATTTCGGCGCGAATATGGAGTTCCTGGGCGCCACCATGCAACAAACTGTGCATGCTGAACAAAGCGC
GATTAGCCACGCCTGGCTACGCGGCGAAAAAGGGCTCGCCGCCGTCACCGTTAACTACACGCCTTGCGGCCACTGTCGCC
AGTTTATGAACGAGCTGAACAGCGGTCTGGATCTGCGCATTCATCTGCCGGGCCGCGCGCCGCATACGTTACGCGATTAT
CTGCCTGACGCTTTCGGGCCAAAAGATCTGGAGATCAAAACGCTGCTGATGGACGAGCAGGATCATGGCTTTACGTTAAC
GGGCAATACGCTAACGCAAGCGGCGATTACGGCAGCCAATAAGAGCCATATGCCTTATAGCCACTCACCGAGCGGCGTGG
CGCTGGAATGTAAAGATGGCCGTATTTTCACCGGCAGCTATGCGGAAAACGCCGCCTTTAACCCTACGCTTCCCCCACTG
CAAGGCGCGCTAAACCTGCTGAGTCTCAATGGCTATGACTATGCGGATATTCAGCGCGCGATTCTGGCGGAAAAAGGCGA
TGCGGCATTAATTCAATGGGATGCCACCGCCGCAACGCTGAAAGCGTTAGGTTGCCATAATATTGACCGCGTGCTTCTCG
GCTAA

Upstream 100 bases:

>100_bases
TAAGTTTCACAAGTTGCATAAGCAATGAGATTTAGATCACATATTAAGACATGGCAGGCCCGTAAACTACGGTTCCATTA
CATTGTTATGAGGCAACGCC

Downstream 100 bases:

>100_bases
GCAAATGTGCCGGATAGCGACGCACTGGCGTCTTATCCGGCCTGACTCTCCTCTCCCGCGACCCGATACAAGGGAAATCA
TGCTGAAAATCTCCGCAATC

Product: cytidine deaminase

Products: NA

Alternate protein names: Cytidine aminohydrolase; CDA [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNTAGLDEDALAFALLPLAAACARTDLSHFNVGAIARGV
SGNWYFGANMEFLGATMQQTVHAEQSAISHAWLRGEKGLAAVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDY
LPDAFGPKDLEIKTLLMDEQDHGFTLTGNTLTQAAITAANKSHMPYSHSPSGVALECKDGRIFTGSYAENAAFNPTLPPL
QGALNLLSLNGYDYADIQRAILAEKGDAALIQWDATAATLKALGCHNIDRVLLG

Sequences:

>Translated_294_residues
MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNTAGLDEDALAFALLPLAAACARTDLSHFNVGAIARGV
SGNWYFGANMEFLGATMQQTVHAEQSAISHAWLRGEKGLAAVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDY
LPDAFGPKDLEIKTLLMDEQDHGFTLTGNTLTQAAITAANKSHMPYSHSPSGVALECKDGRIFTGSYAENAAFNPTLPPL
QGALNLLSLNGYDYADIQRAILAEKGDAALIQWDATAATLKALGCHNIDRVLLG
>Mature_294_residues
MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNTAGLDEDALAFALLPLAAACARTDLSHFNVGAIARGV
SGNWYFGANMEFLGATMQQTVHAEQSAISHAWLRGEKGLAAVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDY
LPDAFGPKDLEIKTLLMDEQDHGFTLTGNTLTQAAITAANKSHMPYSHSPSGVALECKDGRIFTGSYAENAAFNPTLPPL
QGALNLLSLNGYDYADIQRAILAEKGDAALIQWDATAATLKALGCHNIDRVLLG

Specific function: This enzyme scavenge exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis [H]

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788465, Length=293, Percent_Identity=87.3720136518771, Blast_Score=497, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR013171
- InterPro:   IPR006263
- InterPro:   IPR016193
- InterPro:   IPR020797 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1; PF08211 dCMP_cyt_deam_2 [H]

EC number: =3.5.4.5 [H]

Molecular weight: Translated: 31618; Mature: 31618

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNTAGLDEDALAFALLPLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHH
AACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAEQSAISHAWLRGEKGLA
HHHHHCCCCCCCHHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDYLPDAFGPKDLEIKTLLMDEQ
EEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEECCC
DHGFTLTGNTLTQAAITAANKSHMPYSHSPSGVALECKDGRIFTGSYAENAAFNPTLPPL
CCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHH
QGALNLLSLNGYDYADIQRAILAEKGDAALIQWDATAATLKALGCHNIDRVLLG
HHHHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNTAGLDEDALAFALLPLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHH
AACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAEQSAISHAWLRGEKGLA
HHHHHCCCCCCCHHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDYLPDAFGPKDLEIKTLLMDEQ
EEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEECCC
DHGFTLTGNTLTQAAITAANKSHMPYSHSPSGVALECKDGRIFTGSYAENAAFNPTLPPL
CCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHH
QGALNLLSLNGYDYADIQRAILAEKGDAALIQWDATAATLKALGCHNIDRVLLG
HHHHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA