Click here to switch to the map view.

The map label for this gene is yeiR [H]

Identifier: 29141153

GI number: 29141153

Start: 725832

End: 726818

Strand: Reverse

Name: yeiR [H]

Synonym: t0643

Alternate gene names: 29141153

Gene position: 726818-725832 (Counterclockwise)

Preceding gene: 29141154

Following gene: 29141152

Centisome position: 15.17

GC content: 55.72

Gene sequence:

>987_bases
GTGACCAAAACCAATCTTATTACTGGATTTCTCGGTAGCGGAAAAACCACCTCTATCCTTCATTTATTAGCTCATAAAGA
TCCGGCTGAAAAGTGGGCCGTCCTGGTTAATGAATTTGGTGAAGTGGGTATTGACGGCGCGCTGCTTGCCGACAGCGGCG
CACTGCTAAAAGAGATTCCCGGCGGCTGCATGTGCTGCGTCAACGGATTGCCTATGCAGGTGGGGCTCAACACGCTGCTG
CGCCAGGGCAAACCTGACCGGTTGCTGATTGAACCAACCGGACTGGGGCACCCAAAACAGATTCTGGATTTATTAACTGC
GCCGGTTTATGAGCCGTGGATTGATTTACGCGCCACGCTCTGCATCCTGGACCCTCGCCTGCTACTGGACCAACAGAGCG
TCGCCAATGAAAATTTCCGCGATCAGCTCGCCTCAGCCGATATTATCATCGCCAATAAAACCGACCGCGCCACGGCGCAG
AGCGATGCCGCCCTGCAACAGTGGTGGCGACAGTACGGCGGCGATCGTCAACTGATTCATGCCGAACATGGACAGATAGA
CGGTAAGCTTCTGGATTTACCGCGACAAAATCTGGCGGAACTGCCGGCCAGCGCCGCGCATTCTCACACTCATGCCAGTA
AAAAAGGACTCGCCGCGCTAAATCTGCCCGCACAGCAGCGCTGGCGACGCAGCCTCAATAGCGGACAGGGTCATCAGGCC
TGCGGCTGGATTTTCGATGCCGATACCGTGTTTGACACCATTGGCCTACTCGAATGGGCTCGTCTGGCGCCGGTGGGCCG
GGTGAAAGGCGTTATGCGCATACAAGAGGGGCTGGTACGCATCAATCGCCAGGGCGATGACCTGCACATCGAAACACAGA
GTGTCGCGCCGCCGGATAGCCGGGTTGAACTTATCTCAAACACAGAAACCGACTGGAATACGTTACAGACGGCCTTGTTG
AAGCTTCGTTTAGCGACGCACGCGTAA

Upstream 100 bases:

>100_bases
GGCAGAAGCACGACTTCGTCAACTCAGCACTTCTCTTTTTCACGTTTATTCGCCAGGATTATTAAAAGTTGTTATGTTGT
ATCAATATTCTGGAGCTGAC

Downstream 100 bases:

>100_bases
GGTTGCCACCGTTTAAAAACTATGGCGAAATGACGATGAAAACCCGCTATTCCTTGATAATTCTGCTTAATGCCGCCGGT
CTGGCGCTGTTTTTGTCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTKTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLL
RQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDQQSVANENFRDQLASADIIIANKTDRATAQ
SDAALQQWWRQYGGDRQLIHAEHGQIDGKLLDLPRQNLAELPASAAHSHTHASKKGLAALNLPAQQRWRRSLNSGQGHQA
CGWIFDADTVFDTIGLLEWARLAPVGRVKGVMRIQEGLVRINRQGDDLHIETQSVAPPDSRVELISNTETDWNTLQTALL
KLRLATHA

Sequences:

>Translated_328_residues
MTKTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLL
RQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDQQSVANENFRDQLASADIIIANKTDRATAQ
SDAALQQWWRQYGGDRQLIHAEHGQIDGKLLDLPRQNLAELPASAAHSHTHASKKGLAALNLPAQQRWRRSLNSGQGHQA
CGWIFDADTVFDTIGLLEWARLAPVGRVKGVMRIQEGLVRINRQGDDLHIETQSVAPPDSRVELISNTETDWNTLQTALL
KLRLATHA
>Mature_327_residues
TKTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLR
QGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDQQSVANENFRDQLASADIIIANKTDRATAQS
DAALQQWWRQYGGDRQLIHAEHGQIDGKLLDLPRQNLAELPASAAHSHTHASKKGLAALNLPAQQRWRRSLNSGQGHQAC
GWIFDADTVFDTIGLLEWARLAPVGRVKGVMRIQEGLVRINRQGDDLHIETQSVAPPDSRVELISNTETDWNTLQTALLK
LRLATHA

Specific function: Unknown

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI223941779, Length=234, Percent_Identity=28.2051282051282, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI126722884, Length=209, Percent_Identity=29.6650717703349, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI33469141, Length=209, Percent_Identity=29.6650717703349, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI146231952, Length=209, Percent_Identity=29.6650717703349, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI148727351, Length=209, Percent_Identity=29.6650717703349, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI223941776, Length=203, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1788499, Length=328, Percent_Identity=87.5, Blast_Score=597, Evalue=1e-172,
Organism=Escherichia coli, GI87082430, Length=194, Percent_Identity=31.4432989690722, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 35934; Mature: 35802

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIP
CCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCC
GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL
CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH
CILDPRLLLDQQSVANENFRDQLASADIIIANKTDRATAQSDAALQQWWRQYGGDRQLIH
EEECCHHHHCCHHHHCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE
AEHGQIDGKLLDLPRQNLAELPASAAHSHTHASKKGLAALNLPAQQRWRRSLNSGQGHQA
CCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCC
CGWIFDADTVFDTIGLLEWARLAPVGRVKGVMRIQEGLVRINRQGDDLHIETQSVAPPDS
EEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH
RVELISNTETDWNTLQTALLKLRLATHA
HHHEECCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIP
CCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCC
GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL
CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH
CILDPRLLLDQQSVANENFRDQLASADIIIANKTDRATAQSDAALQQWWRQYGGDRQLIH
EEECCHHHHCCHHHHCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE
AEHGQIDGKLLDLPRQNLAELPASAAHSHTHASKKGLAALNLPAQQRWRRSLNSGQGHQA
CCCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCC
CGWIFDADTVFDTIGLLEWARLAPVGRVKGVMRIQEGLVRINRQGDDLHIETQSVAPPDS
EEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH
RVELISNTETDWNTLQTALLKLRLATHA
HHHEECCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]