Click here to switch to the map view.

The map label for this gene is yejA [H]

Identifier: 29141149

GI number: 29141149

Start: 720303

End: 722108

Strand: Reverse

Name: yejA [H]

Synonym: t0639

Alternate gene names: 29141149

Gene position: 722108-720303 (Counterclockwise)

Preceding gene: 29141150

Following gene: 29141148

Centisome position: 15.07

GC content: 52.05

Gene sequence:

>1806_bases
ATGATTGCGCGCGTAATGCTTCTGCTTGTCGCACTGGTTAGCGCTGGCGCCCAGGCCCAGGAAATCAAAGAAAGCTACGC
TTTCGCCGTACTCGGCGAACCTAAGTATGCTTTTAACTTTGATCACTTTGATTATGTGAATCCTGCTGCGCCGAAAGGCG
GTCAGATGACGCTTTCCGCCATTGGTACGTTCGATAATTTCAATCGCTATTCGCTGCGCGGCAATCCCGGCGTACGTACC
GAAGCCCTTTACGATACGCTTTTTACCACCTCGGATGATGAACCCGGAAGCTATTACCCGCTGATTGCCGACCATGCCCG
CTATGCCGCCGACTATTCCTGGGTGGAAATCTCGATTAACCCCCGCGCTCGTTTTCACGATGGCACGCCCATTACCGCCC
GCGATGTAGCCTTTACCTTTCATAAGTTTATGACCGAAGGCGTACCGCAGTTCCGTCTGGTCTATAAAGGTACTACCGTG
AAGGCGATTGCGCCTTTAACCGTGCGAATTGAGCTGGCGAAGCCTGGTAAAGAAGACATGCTTAGTCTGTTTTCACTACC
GATCATGCCCGAAAAATTCTGGAAAAATCACAAACTCAGCGATCCACTTTCAACGCCGCCCTTAGCCAGCGGGCCATACC
GGATTACTCAGTGGAAAATGGGCCAGTACATTGTCTATTCACGCGTCAAAAACTACTGGGCGGCTAATCTGCCGGTCAAT
CGTGGACGTTTTAACCTCGACACTGTCCGCTACGATTACTACCTTGATGACAATGTCGCTTTCGAGGCGTTTAAAGCGGG
CGCATTTGATCTACGGCTGGAAAACGACGCTAAAAACTGGGCAACGCGCTATATCGGTAAAAATTTCGATAATCATTACA
TCATTAAAGAAGAGCAGAAAAACGAGTCGGCGCAGGACACACGCTGGCTGGCCTTTAATATTCAGCGCCCGGTATTTAAA
GACCGGCGGGTACGTGAAGCCGTCACCCTGGCCTTCGATTTTGAGTGGATGAATAAAGCGCTGTTCTATAATGCCTGGAG
CCGAACCAACAGTTACTTCCAGAATACCGAGTACGCCGCCAGAAATTATCCTGACGCCGACGAACTGGTATTACTCGCGC
CGATGAAAAAAGATCTTCCTCCTGAAGTCTTCACTCAGATCTATCAGCCGCCGGTCTCTAACGGCGACGGCTACGATCGC
GAAAATCTTCTTAAAGCTGACGCCTTGTTGACGCAGGCCGGATGGGTGATCAACGGACAGCAACGGGTCAATAGCGTCAC
CGGTAAGCCTCTGACGTTTGAACTTCTCCTTCCTGCCAGCAGTAATAGCCAGTGGGTTCTGCCCTTCCAGCATAATCTTC
AGCGTCTGGGCATTACGATGACTATCCGTCAGGTTGATAATTCTCAACTCACCAACCGGATGCGTAGCCGCGACTATGAC
ATGATGCCGAGGCTATGGCGGGCGATGCCCTGGCCCAGCTCCGATCTACAAATCTCATGGGCGTCGGAATACATTGACTC
CAGTTATAACGCTCCCGGCGTACAAAGCCCGGTGGTGGATAAGCTGATCGCGCAAATTATCGCAGCGCAGGGTGATAAAG
CGAAACTGGTGCCGCTGGGACGGGCGCTGGATCGCGTGCTGACCTGGAACTATTACATGCTGCCGATGTGGTATATGGCG
CAAGACAGGCTCGCCTGGTGGGATAAATTCTCCCATCCGGCGATTCGCCCGGTATATACCATCGGGTTAGATACCTGGTG
GTATGATGTCAACAAAGCCGCCAAGCTACCGGCAGCCAGGAGGTAG

Upstream 100 bases:

>100_bases
TACGGTTTTAACGGATTCACATCAGACGCAACGTCACTTATTATTCAGCGAAACGCCTGCCGGTTTGCAGCGGGCAATAC
GATAAGGAAACCGCCTTCAG

Downstream 100 bases:

>100_bases
TAAGAATCAATGGGTGCCTATCTTATCCGCCGTCTGTTACTGGTGATCCCCACGCTATGGGCCATTATTACCATTAACTT
TTTTATCGTGCAGATCGCTC

Product: transport system periplasmic binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFDYVNPAAPKGGQMTLSAIGTFDNFNRYSLRGNPGVRT
EALYDTLFTTSDDEPGSYYPLIADHARYAADYSWVEISINPRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTV
KAIAPLTVRIELAKPGKEDMLSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQWKMGQYIVYSRVKNYWAANLPVN
RGRFNLDTVRYDYYLDDNVAFEAFKAGAFDLRLENDAKNWATRYIGKNFDNHYIIKEEQKNESAQDTRWLAFNIQRPVFK
DRRVREAVTLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDADELVLLAPMKKDLPPEVFTQIYQPPVSNGDGYDR
ENLLKADALLTQAGWVINGQQRVNSVTGKPLTFELLLPASSNSQWVLPFQHNLQRLGITMTIRQVDNSQLTNRMRSRDYD
MMPRLWRAMPWPSSDLQISWASEYIDSSYNAPGVQSPVVDKLIAQIIAAQGDKAKLVPLGRALDRVLTWNYYMLPMWYMA
QDRLAWWDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAARR

Sequences:

>Translated_601_residues
MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFDYVNPAAPKGGQMTLSAIGTFDNFNRYSLRGNPGVRT
EALYDTLFTTSDDEPGSYYPLIADHARYAADYSWVEISINPRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTV
KAIAPLTVRIELAKPGKEDMLSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQWKMGQYIVYSRVKNYWAANLPVN
RGRFNLDTVRYDYYLDDNVAFEAFKAGAFDLRLENDAKNWATRYIGKNFDNHYIIKEEQKNESAQDTRWLAFNIQRPVFK
DRRVREAVTLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDADELVLLAPMKKDLPPEVFTQIYQPPVSNGDGYDR
ENLLKADALLTQAGWVINGQQRVNSVTGKPLTFELLLPASSNSQWVLPFQHNLQRLGITMTIRQVDNSQLTNRMRSRDYD
MMPRLWRAMPWPSSDLQISWASEYIDSSYNAPGVQSPVVDKLIAQIIAAQGDKAKLVPLGRALDRVLTWNYYMLPMWYMA
QDRLAWWDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAARR
>Mature_601_residues
MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFDYVNPAAPKGGQMTLSAIGTFDNFNRYSLRGNPGVRT
EALYDTLFTTSDDEPGSYYPLIADHARYAADYSWVEISINPRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTV
KAIAPLTVRIELAKPGKEDMLSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQWKMGQYIVYSRVKNYWAANLPVN
RGRFNLDTVRYDYYLDDNVAFEAFKAGAFDLRLENDAKNWATRYIGKNFDNHYIIKEEQKNESAQDTRWLAFNIQRPVFK
DRRVREAVTLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDADELVLLAPMKKDLPPEVFTQIYQPPVSNGDGYDR
ENLLKADALLTQAGWVINGQQRVNSVTGKPLTFELLLPASSNSQWVLPFQHNLQRLGITMTIRQVDNSQLTNRMRSRDYD
MMPRLWRAMPWPSSDLQISWASEYIDSSYNAPGVQSPVVDKLIAQIIAAQGDKAKLVPLGRALDRVLTWNYYMLPMWYMA
QDRLAWWDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAARR

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae hbpA [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=601, Percent_Identity=86.3560732113145, Blast_Score=1109, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69181; Mature: 69181

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFDYVNPAAPKGGQMTLSA
CHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEE
IGTFDNFNRYSLRGNPGVRTEALYDTLFTTSDDEPGSYYPLIADHARYAADYSWVEISIN
EECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHCCCEEEEEEEC
PRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM
CCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH
LSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQWKMGQYIVYSRVKNYWAANLPVN
HHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHEEECCCCC
RGRFNLDTVRYDYYLDDNVAFEAFKAGAFDLRLENDAKNWATRYIGKNFDNHYIIKEEQK
CCCEEEEEEEEEEEECCCCEEHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCC
NESAQDTRWLAFNIQRPVFKDRRVREAVTLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA
CCCCCCCEEEEEEECCCCHHHHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHCCCCHHH
RNYPDADELVLLAPMKKDLPPEVFTQIYQPPVSNGDGYDRENLLKADALLTQAGWVINGQ
CCCCCHHCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECH
QRVNSVTGKPLTFELLLPASSNSQWVLPFQHNLQRLGITMTIRQVDNSQLTNRMRSRDYD
HHHHHCCCCCEEEEEEEECCCCCCEEEEHHHCHHHCCEEEEEEECCCHHHHHHHHHCCCH
MMPRLWRAMPWPSSDLQISWASEYIDSSYNAPGVQSPVVDKLIAQIIAAQGDKAKLVPLG
HHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH
RALDRVLTWNYYMLPMWYMAQDRLAWWDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAAR
HHHHHHHCCCEEEEEHEEHHHHHHHHHHHCCCCCCCEEEEEECEEEEEECCHHHCCCCCC
R
C
>Mature Secondary Structure
MIARVMLLLVALVSAGAQAQEIKESYAFAVLGEPKYAFNFDHFDYVNPAAPKGGQMTLSA
CHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEE
IGTFDNFNRYSLRGNPGVRTEALYDTLFTTSDDEPGSYYPLIADHARYAADYSWVEISIN
EECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHCCCEEEEEEEC
PRARFHDGTPITARDVAFTFHKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM
CCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH
LSLFSLPIMPEKFWKNHKLSDPLSTPPLASGPYRITQWKMGQYIVYSRVKNYWAANLPVN
HHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHEEECCCCC
RGRFNLDTVRYDYYLDDNVAFEAFKAGAFDLRLENDAKNWATRYIGKNFDNHYIIKEEQK
CCCEEEEEEEEEEEECCCCEEHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCC
NESAQDTRWLAFNIQRPVFKDRRVREAVTLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA
CCCCCCCEEEEEEECCCCHHHHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHCCCCHHH
RNYPDADELVLLAPMKKDLPPEVFTQIYQPPVSNGDGYDRENLLKADALLTQAGWVINGQ
CCCCCHHCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECH
QRVNSVTGKPLTFELLLPASSNSQWVLPFQHNLQRLGITMTIRQVDNSQLTNRMRSRDYD
HHHHHCCCCCEEEEEEEECCCCCCEEEEHHHCHHHCCEEEEEEECCCHHHHHHHHHCCCH
MMPRLWRAMPWPSSDLQISWASEYIDSSYNAPGVQSPVVDKLIAQIIAAQGDKAKLVPLG
HHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH
RALDRVLTWNYYMLPMWYMAQDRLAWWDKFSHPAIRPVYTIGLDTWWYDVNKAAKLPAAR
HHHHHHHCCCEEEEEHEEHHHHHHHHHHHCCCCCCCEEEEEECEEEEEECCHHHCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]