Click here to switch to the map view.

The map label for this gene is yfaE [H]

Identifier: 29141100

GI number: 29141100

Start: 661870

End: 662124

Strand: Reverse

Name: yfaE [H]

Synonym: t0585

Alternate gene names: 29141100

Gene position: 662124-661870 (Counterclockwise)

Preceding gene: 29141101

Following gene: 29141098

Centisome position: 13.82

GC content: 56.08

Gene sequence:

>255_bases
ATGGGACGCGTCACGCTGCGTATCACTGGCACACAGCTGCTGTGCCAGGATGAACACCCTTCTCTGCTGGCCGCGCTGGA
ATCGCATAACGTTGAGGTGGAGTATCAGTGCCGCGAAGGATATTGCGGCTCCTGTCGTACCCGGCTGGTTGCCGGTCAGG
TTGACTGGATTACGGAACCTTTAGCGTTTATCCAGCCGGGAGAGATTTTGCCCTGCTGCTGCAGGGCAAAAGGCGATATC
GAAATCGAGATGTAA

Upstream 100 bases:

>100_bases
ACGTTCAGGTTGCGCCACAGGAAGTGGAAGTTAGTTCTTATCTGGTCGGACAAATCGATTCGGAAGTCGATACCGACGAT
CTGAGTAATTTCCAGCTCTG

Downstream 100 bases:

>100_bases
CTCAGTGCAACTCGCTGGTGGAAACCAACGGCATCACGCCACGTTTTTTCATCTGCACGGCATACAGTGCGCCAGCGAGT
ACCACCAGCACCGCGCCAGC

Product: 2Fe-2S ferredoxin YfaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MGRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGSCRTRLVAGQVDWITEPLAFIQPGEILPCCCRAKGDI
EIEM

Sequences:

>Translated_84_residues
MGRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGSCRTRLVAGQVDWITEPLAFIQPGEILPCCCRAKGDI
EIEM
>Mature_83_residues
GRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGSCRTRLVAGQVDWITEPLAFIQPGEILPCCCRAKGDIE
IEM

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788568, Length=84, Percent_Identity=96.4285714285714, Blast_Score=169, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 9367; Mature: 9236

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
8.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGSCRTRLVAGQVDWITEP
CCEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCC
LAFIQPGEILPCCCRAKGDIEIEM
CCCCCCCCCCEEECCCCCCEEEEC
>Mature Secondary Structure 
GRVTLRITGTQLLCQDEHPSLLAALESHNVEVEYQCREGYCGSCRTRLVAGQVDWITEP
CEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCC
LAFIQPGEILPCCCRAKGDIEIEM
CCCCCCCCCCEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]