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The map label for this gene is arnF [H]

Identifier: 29141075

GI number: 29141075

Start: 635798

End: 636175

Strand: Reverse

Name: arnF [H]

Synonym: t0560

Alternate gene names: 29141075

Gene position: 636175-635798 (Counterclockwise)

Preceding gene: 29141076

Following gene: 29141065

Centisome position: 13.28

GC content: 53.44

Gene sequence:

>378_bases
ATGGGCGTAATGTGGGGACTGATAAGCGTTGCGATTGCCTCCCTCGCCCAGTTGAGTTTAGGATTCGCCATGATGCGACT
GCCATCGATAGCGCATCCACTGGCGTTTATTTCCGGGCTGGGCGCATTTAATGCCGCGACCCTGGCGCTATTCGCCGGTT
TGGCGGGATATCTGGTTTCCGTCTTCTGCTGGCAGAAAACATTACACATGCTCGCGCTCAGCAAAGCCTATGCGCTGCTG
AGTCTCAGTTATGTGCTTGTCTGGGTAGCCTCAATGTTGTTACCCGGTTTGCAAGGCGCTTTCAGCCTAAAAGCGATGCT
CGGCGTATTGTGCATTATGGCGGGGGTAATGCTGATTTTTCTGCCCGCCAGATCATAA

Upstream 100 bases:

>100_bases
TGGCGGCCTGGAAAATCTGGCATGAACAGGTTCTGCCCCGCCACTGGTTGGGCGTCGCATTAATTATCAGCGGCATTATC
ATTCTGGGGAGTGCGGCATA

Downstream 100 bases:

>100_bases
TGGCTTGCGCGTCAACCGCTGCCATTCGTCGCAGGAATAACAGCGTGCATCAACGATTTTTAAGGTCTGGTGTTTTTCCC
GATTAATACAATACTGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGVMWGLISVAIASLAQLSLGFAMMRLPSIAHPLAFISGLGAFNAATLALFAGLAGYLVSVFCWQKTLHMLALSKAYALL
SLSYVLVWVASMLLPGLQGAFSLKAMLGVLCIMAGVMLIFLPARS

Sequences:

>Translated_125_residues
MGVMWGLISVAIASLAQLSLGFAMMRLPSIAHPLAFISGLGAFNAATLALFAGLAGYLVSVFCWQKTLHMLALSKAYALL
SLSYVLVWVASMLLPGLQGAFSLKAMLGVLCIMAGVMLIFLPARS
>Mature_124_residues
GVMWGLISVAIASLAQLSLGFAMMRLPSIAHPLAFISGLGAFNAATLALFAGLAGYLVSVFCWQKTLHMLALSKAYALLS
LSYVLVWVASMLLPGLQGAFSLKAMLGVLCIMAGVMLIFLPARS

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family [H]

Homologues:

Organism=Escherichia coli, GI87082075, Length=125, Percent_Identity=67.2, Blast_Score=143, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022832 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13151; Mature: 13020

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVMWGLISVAIASLAQLSLGFAMMRLPSIAHPLAFISGLGAFNAATLALFAGLAGYLVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VFCWQKTLHMLALSKAYALLSLSYVLVWVASMLLPGLQGAFSLKAMLGVLCIMAGVMLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LPARS
HCCCC
>Mature Secondary Structure 
GVMWGLISVAIASLAQLSLGFAMMRLPSIAHPLAFISGLGAFNAATLALFAGLAGYLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VFCWQKTLHMLALSKAYALLSLSYVLVWVASMLLPGLQGAFSLKAMLGVLCIMAGVMLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LPARS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA