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The map label for this gene is sfsB [H]

Identifier: 29141005

GI number: 29141005

Start: 562947

End: 563195

Strand: Reverse

Name: sfsB [H]

Synonym: t0490

Alternate gene names: 29141005

Gene position: 563195-562947 (Counterclockwise)

Preceding gene: 29141008

Following gene: 29141004

Centisome position: 11.75

GC content: 49.4

Gene sequence:

>249_bases
ATGGAACCAAAAAGCCAAGACTGGCATCGTGCAGATATTAAAAGTGCACTGGAAAAAAGAGGTATTACGCTCAGAGATCT
TTCTCGTCAGGCCGGTTTATCACCTGATTCACTGCGCAATGTCTTTACCCGTTCCTGGCCGAGAGCCGAACGGATTATTG
CGGACGCGCTGGGCATCACGCCGCAGGAGATCTGGCCGTCGCGCTATGGCGATATGCAAATAAAAAATGATGCCGATATC
GCAGAATAA

Upstream 100 bases:

>100_bases
CACTATTCTTAGCGTGAAAAAGAAAGTAACTTCCTTTTCCATGCGCTAATTTTATCTTAAAAATATCGGCGCCGATAACA
CATCTTCTTAGGATTACAGA

Downstream 100 bases:

>100_bases
TAGTTAATGCTGAATAAATTGGCTTTAACTTATCAATCTCAACAATTAATAAATATTTAAACTTATTATATTGAAAATAG
TAATAGCACGATCTGTCATG

Product: DNA-binding protein

Products: NA

Alternate protein names: Ner-like protein [H]

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYGDMQIKNDADI
AE

Sequences:

>Translated_82_residues
MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYGDMQIKNDADI
AE
>Mature_82_residues
MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYGDMQIKNDADI
AE

Specific function: This protein is involved in positive regulation of the metabolism of sugars [H]

COG id: COG3423

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ner transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1789579, Length=79, Percent_Identity=48.1012658227848, Blast_Score=74, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010982 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9391; Mature: 9391

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGIT
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
PQEIWPSRYGDMQIKNDADIAE
HHHHCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGIT
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
PQEIWPSRYGDMQIKNDADIAE
HHHHCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]