Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yfeJ [H]
Identifier: 29140947
GI number: 29140947
Start: 493364
End: 494083
Strand: Reverse
Name: yfeJ [H]
Synonym: t0420
Alternate gene names: 29140947
Gene position: 494083-493364 (Counterclockwise)
Preceding gene: 29140948
Following gene: 29140946
Centisome position: 10.31
GC content: 54.17
Gene sequence:
>720_bases GTGCGAGTTCATTTTGTTATCCATGAGTCGTTTGAATCCGCTGGCGCTTATCTGAAATGGGCTGAAGATCGCGGTTATAC CATTTCATGGTCGCGCGTCTATGCCGGAGAAGCGCTACCGCCCAATGCAGATGAGTTCGATATGCTCGTGGTATTTGGCG GTCCGCAGTCGCCGCGCACCACCCGCGAAGAGTGCCCGTACTTTGATTCTCAGGCCGAGCAACATCTGATTAACCAGGCG ATTTCGGCACGAAAAATCGTGGTGGGGATCTGTTTGGGCTCGCAGTTAATTGGCGAAGCGCTGGGCGCCAAGGTGTGCCA AAGTCCGGAAAAAGAGATCGGTCACTACCCAATCGTCCTGACCGAGGCAGGCCAACAGCACCCGCTGTTCAACCATTTCG GCTCCCCGCTTATCGTCGGTCACTGGCATAACGACATGCCGGGGTTAACCGACCAGGCGATAATTCTTGCTACCAGTGAG GGCTGCCCGCGACAAATCGTGCAGTACGGCAATTTTGTCTACGGCTTCCAGTGTCATATGGAATTTACCGTCGAGGCGGT TGAAGGATTAATCCAACATTCGCAGCAGGAGCTGGCCGACGCGCAAGGGAAGCGTTTTATCCGCTCGGTCGCCGAGATGC GCGCATGGAATTATCAGCAGATGAATGAAAAGCTGTGGCGTTTTCTGGATGAACTCACGCTGGCGCACTCACAGAAATAA
Upstream 100 bases:
>100_bases ACGGTCTACGTATCACGCTGTCGACATTAAATGACGGCGAGATCAACACGCTGGCGGCTGATATCCATCAGGCGCTAAAT CGCTAACAGGAGAAAATAAC
Downstream 100 bases:
>100_bases CCACACCAGGAGTGCAACTTATTACCCGGCTAACGGTCTGAGGTGCAGTGATTATTGCATGAAAAAGGATTTTACCATGA AGAAAATTGTCTGCGCCGTC
Product: glutamine amidotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MRVHFVIHESFESAGAYLKWAEDRGYTISWSRVYAGEALPPNADEFDMLVVFGGPQSPRTTREECPYFDSQAEQHLINQA ISARKIVVGICLGSQLIGEALGAKVCQSPEKEIGHYPIVLTEAGQQHPLFNHFGSPLIVGHWHNDMPGLTDQAIILATSE GCPRQIVQYGNFVYGFQCHMEFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRAWNYQQMNEKLWRFLDELTLAHSQK
Sequences:
>Translated_239_residues MRVHFVIHESFESAGAYLKWAEDRGYTISWSRVYAGEALPPNADEFDMLVVFGGPQSPRTTREECPYFDSQAEQHLINQA ISARKIVVGICLGSQLIGEALGAKVCQSPEKEIGHYPIVLTEAGQQHPLFNHFGSPLIVGHWHNDMPGLTDQAIILATSE GCPRQIVQYGNFVYGFQCHMEFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRAWNYQQMNEKLWRFLDELTLAHSQK >Mature_239_residues MRVHFVIHESFESAGAYLKWAEDRGYTISWSRVYAGEALPPNADEFDMLVVFGGPQSPRTTREECPYFDSQAEQHLINQA ISARKIVVGICLGSQLIGEALGAKVCQSPEKEIGHYPIVLTEAGQQHPLFNHFGSPLIVGHWHNDMPGLTDQAIILATSE GCPRQIVQYGNFVYGFQCHMEFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRAWNYQQMNEKLWRFLDELTLAHSQK
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 27007; Mature: 27007
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVHFVIHESFESAGAYLKWAEDRGYTISWSRVYAGEALPPNADEFDMLVVFGGPQSPRT CEEEEEEECCHHCCCCEEEEECCCCEEEEEHEEEECCCCCCCCCCEEEEEEECCCCCCCC TREECPYFDSQAEQHLINQAISARKIVVGICLGSQLIGEALGAKVCQSPEKEIGHYPIVL CHHHCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCEEE TEAGQQHPLFNHFGSPLIVGHWHNDMPGLTDQAIILATSEGCPRQIVQYGNFVYGFQCHM ECCCCCCCCHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCEEEEEEEEE EFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRAWNYQQMNEKLWRFLDELTLAHSQK EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVHFVIHESFESAGAYLKWAEDRGYTISWSRVYAGEALPPNADEFDMLVVFGGPQSPRT CEEEEEEECCHHCCCCEEEEECCCCEEEEEHEEEECCCCCCCCCCEEEEEEECCCCCCCC TREECPYFDSQAEQHLINQAISARKIVVGICLGSQLIGEALGAKVCQSPEKEIGHYPIVL CHHHCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCHHHHHCCCCEEE TEAGQQHPLFNHFGSPLIVGHWHNDMPGLTDQAIILATSEGCPRQIVQYGNFVYGFQCHM ECCCCCCCCHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCEEEEEEEEE EFTVEAVEGLIQHSQQELADAQGKRFIRSVAEMRAWNYQQMNEKLWRFLDELTLAHSQK EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]