Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yfgD [H]
Identifier: 29140890
GI number: 29140890
Start: 431300
End: 431659
Strand: Reverse
Name: yfgD [H]
Synonym: t0362
Alternate gene names: 29140890
Gene position: 431659-431300 (Counterclockwise)
Preceding gene: 29140891
Following gene: 29140886
Centisome position: 9.01
GC content: 56.67
Gene sequence:
>360_bases ATGACCGACACGATTAAAATCTACCATAACCCGCGCTGCTCGAAGAGCCGCGACACGCTGAACCTGCTGAAATCTAACGG CGTGGAACCGGAAGTGGTGCTTTATCTGGATACGCCCGCCGATGCCGCCACCGTGCGGGAACTGCTGCGTATGTTGGGCA TGTCCAGCGCGCGCGAACTGATGCGCCAGAAAGAAGATCTCTATAAGACGCTTCACCTGGCGGATAGCCAGCTAAGTGAA GAGGCGTTAATCCAGGCGCTGGTTGAACACCCTAAACTGATGGAGCGCCCCATTGTAGTGGCAAATGGTCAGGCGCGTAT TGGCCGACCGCCTGAGCAGGTGCTGGACATCCTCGGTTAA
Upstream 100 bases:
>100_bases TGCGCGTATCGACCAGTTGCGCCAGTTACAGGAACGCTTCAAGCCATACACGAAAATGTAATCGCCGTTTATTAGCCGGA TGGCGTCACAAGGAGAACTC
Downstream 100 bases:
>100_bases CCGTTAAACGCCGCCGTCGCGGCGTATTACAGTTTCAGGATCTCTTTGACAAACGGGATCGTCAGTTTTCGCTGGGCAGT GATCGACGCATGATCGAGCT
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLDTPADAATVRELLRMLGMSSARELMRQKEDLYKTLHLADSQLSE EALIQALVEHPKLMERPIVVANGQARIGRPPEQVLDILG
Sequences:
>Translated_119_residues MTDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLDTPADAATVRELLRMLGMSSARELMRQKEDLYKTLHLADSQLSE EALIQALVEHPKLMERPIVVANGQARIGRPPEQVLDILG >Mature_118_residues TDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLDTPADAATVRELLRMLGMSSARELMRQKEDLYKTLHLADSQLSEE ALIQALVEHPKLMERPIVVANGQARIGRPPEQVLDILG
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=119, Percent_Identity=83.1932773109244, Blast_Score=209, Evalue=5e-56, Organism=Escherichia coli, GI1789918, Length=114, Percent_Identity=40.3508771929825, Blast_Score=92, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13377; Mature: 13246
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLDTPADAATVRELLRMLGMSSAREL CCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHH MRQKEDLYKTLHLADSQLSEEALIQALVEHPKLMERPIVVANGQARIGRPPEQVLDILG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHCCEEEECCCCCCCCCHHHHHHHCC >Mature Secondary Structure TDTIKIYHNPRCSKSRDTLNLLKSNGVEPEVVLYLDTPADAATVRELLRMLGMSSAREL CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHH MRQKEDLYKTLHLADSQLSEEALIQALVEHPKLMERPIVVANGQARIGRPPEQVLDILG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHCCEEEECCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]