Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29140878
Identifier: 29140878
GI number: 29140878
Start: 417501
End: 418190
Strand: Reverse
Name: 29140878
Synonym: t0349
Alternate gene names: NA
Gene position: 418190-417501 (Counterclockwise)
Preceding gene: 29140879
Following gene: 29140874
Centisome position: 8.73
GC content: 44.49
Gene sequence:
>690_bases TTGAAAGATTTTTCAAAATACTCAAAAGCGTTAGGGATGGCTAAGTTCTATGTTTATGCATTTTATGACACTGAAGATGC AGCTAAGAAGCCGTTTTATATAGGCAAAGGCAAGTCAGAACGCTGCCTTGATCATATAAAGTATAATGATGACTCTCCGA AATCAGAACGAATTAATCATCTGTTAAAAACAGGAAATCTGGGTATCGACATACTACGCCATGGCATGGATGAGGCAACC GCGAAGCTTGTTGAAGCAACATGTATTGATCTCTTGGGTGTTGGAGAACTGACCAACAAAGTACGAGGAAGCAGCTCCCT TATGGGGCGAATCACGCTGGATGAGCTCAATCATCTTCTTCTTAAGCAAGAGACGGAAATCGCACCTGAACATGCCGGGC TCGCTTTTTTGCTAAACAGCACCTACAAGTCTGGCATGAGTGCACTTGCATTATATGAAGCTACGCGTGGCGTCTGGGCA AAAGTACCAAAAGATGAAAACCTACAATTTGCATACGCCACCTACGGCGGTTTGGTGATGGAAGTTTACGAGATACAGTG CTGGTTGAAGGCAGGCTCTCAGCAATACTTTACCCGGGAATTGGTCATCCCCCCCCCGAAACCAACCGTTCAGAATTTGT TGGACGAATCGCATCACCAGAAATCAGAGGATTATACGTTGGCAAGCTAA
Upstream 100 bases:
>100_bases ATGGACGCAGGTCAATCTATACGCTAATTGTTTTGCGCTTAAGTTCTGAACTATAGTGCCGATAGTAAAATTAAGTACTT TTGCCTTAAGGAAGCAAGGT
Downstream 100 bases:
>100_bases TCAAAAAATCGCGTAGTCATGGTAGCCCTTTCGTAAAAGTCGGGCTGGCGGAGTAAACTGACCTGCTTCCCGTTGATTAA TACACCTCAATGCCAGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKDFSKYSKALGMAKFYVYAFYDTEDAAKKPFYIGKGKSERCLDHIKYNDDSPKSERINHLLKTGNLGIDILRHGMDEAT AKLVEATCIDLLGVGELTNKVRGSSSLMGRITLDELNHLLLKQETEIAPEHAGLAFLLNSTYKSGMSALALYEATRGVWA KVPKDENLQFAYATYGGLVMEVYEIQCWLKAGSQQYFTRELVIPPPKPTVQNLLDESHHQKSEDYTLAS
Sequences:
>Translated_229_residues MKDFSKYSKALGMAKFYVYAFYDTEDAAKKPFYIGKGKSERCLDHIKYNDDSPKSERINHLLKTGNLGIDILRHGMDEAT AKLVEATCIDLLGVGELTNKVRGSSSLMGRITLDELNHLLLKQETEIAPEHAGLAFLLNSTYKSGMSALALYEATRGVWA KVPKDENLQFAYATYGGLVMEVYEIQCWLKAGSQQYFTRELVIPPPKPTVQNLLDESHHQKSEDYTLAS >Mature_229_residues MKDFSKYSKALGMAKFYVYAFYDTEDAAKKPFYIGKGKSERCLDHIKYNDDSPKSERINHLLKTGNLGIDILRHGMDEAT AKLVEATCIDLLGVGELTNKVRGSSSLMGRITLDELNHLLLKQETEIAPEHAGLAFLLNSTYKSGMSALALYEATRGVWA KVPKDENLQFAYATYGGLVMEVYEIQCWLKAGSQQYFTRELVIPPPKPTVQNLLDESHHQKSEDYTLAS
Specific function: Unknown
COG id: COG3680
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25709; Mature: 25709
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDFSKYSKALGMAKFYVYAFYDTEDAAKKPFYIGKGKSERCLDHIKYNDDSPKSERINH CCCHHHHHHHHHHEEEEEEEEECCCHHCCCCEEEECCCHHHHHHHHCCCCCCCHHHHHHH LLKTGNLGIDILRHGMDEATAKLVEATCIDLLGVGELTNKVRGSSSLMGRITLDELNHLL HHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHEEEEEHHHHHHHH LKQETEIAPEHAGLAFLLNSTYKSGMSALALYEATRGVWAKVPKDENLQFAYATYGGLVM HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEHHCCHHH EVYEIQCWLKAGSQQYFTRELVIPPPKPTVQNLLDESHHQKSEDYTLAS HHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKDFSKYSKALGMAKFYVYAFYDTEDAAKKPFYIGKGKSERCLDHIKYNDDSPKSERINH CCCHHHHHHHHHHEEEEEEEEECCCHHCCCCEEEECCCHHHHHHHHCCCCCCCHHHHHHH LLKTGNLGIDILRHGMDEATAKLVEATCIDLLGVGELTNKVRGSSSLMGRITLDELNHLL HHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHEEEEEHHHHHHHH LKQETEIAPEHAGLAFLLNSTYKSGMSALALYEATRGVWAKVPKDENLQFAYATYGGLVM HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEHHCCHHH EVYEIQCWLKAGSQQYFTRELVIPPPKPTVQNLLDESHHQKSEDYTLAS HHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA