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The map label for this gene is ynfH [C]

Identifier: 29140860

GI number: 29140860

Start: 378333

End: 379142

Strand: Direct

Name: ynfH [C]

Synonym: t0328

Alternate gene names: 29140860

Gene position: 378333-379142 (Clockwise)

Preceding gene: 29140859

Following gene: 29140861

Centisome position: 7.9

GC content: 60.62

Gene sequence:

>810_bases
ATGCATGAGTTACCGCTGCTGATTTTTACGCTCTGTTTGCAAGGGTCCGTGGGCGTGACTCTGTGGCTGGCGCTGGGCCG
TCAGTACGCCGTAGAGGGACGCGTACCTGCGCGCGGCGCGCTTCCCGCGATGGCGGGGGCGTTTGTACTGGCCTGCGTGG
GGCTGCTTGCTTCAGCGCTGCACATGGGCTATCCCCTGAATGCGCTAAACGCGTTACGTCATGTCGCCAGTTCGTGGCTG
AGTCGCGAAATCGTCTTTGCCAGCCTTTATCTGGCGGCGCTGGGGCTGGGGGTTGTGCTGCTGTTTTTCCGAAAGCCTGG
CTGGCAGCCGCTGCTGGCGCTGGCGGCAGCGTTCGGGCTGGTGGATGTATTCTGCATGGCGCAGGTTTATATCCATGCCT
CGGTGGCGACCTGGCAGCATAGCAACACGCTGGCGCTGTTCTTTGGCACGTCAGGCATTATCGGCTCGGTAGTCATTGCG
CTGGCTTATCTGCGCAACGCTGGCGCCGCAATGCGCTGCGCTGTGGTGGTGGTCGCACTGATGGTGCTGATTCGCCTGAT
CATGCAGCCGCTATGGTTGGCGGATATTAATGCAGTGGATACGACGGTCGTCACTTTCCCGCATCATCCGCTACAGGCGC
TGGCGCAGTTGCGCGACATCTATCTTCTCGGCTGGTGTGTCTCAGCGGCGGGAATGCTCTGCTTTGCCGCAGGCGGTCTG
CGAAACGCCAGAGGGACGCTGGTGGCGGGCAGCGTATTGCTGCTTATCGGCGAGATTATGCTGCGCTACGTCTTCTTTAG
TATTGGCTGA

Upstream 100 bases:

>100_bases
GGTAGCGTATGCGACGTTAACGGGCTGCCAGATTCATCCATAACCAAACCTAATCTGGTTGTCAAAGCGCATCAGGGCGC
AGAAAAAGAGGGTAAACGCC

Downstream 100 bases:

>100_bases
TGGTTAACCTGACGATCGATCCGGCGGTAGACGTGACGCAGGCCTGCGTCCGTCGTCGCTTTCGTTTTTCTTCCTGCCGC
GCTTGCACTGATGTTTGTCC

Product: anaerobic reductase subunit

Products: NA

Alternate protein names: Dimethyl Sulfoxide Reductase Subunit C; Anaerobic Reductase Component; Anaerobic DMSO Reductase Chain C Anchor Subunit; Anaerobic Reductase Component C; Anaerobic Reductase Subunit C; DMSO Reductase Anchor Subunit; Molybdopterin Oxidoreductase Iron Sulfur Subunit; Anaerobic Reductase Subunit

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MHELPLLIFTLCLQGSVGVTLWLALGRQYAVEGRVPARGALPAMAGAFVLACVGLLASALHMGYPLNALNALRHVASSWL
SREIVFASLYLAALGLGVVLLFFRKPGWQPLLALAAAFGLVDVFCMAQVYIHASVATWQHSNTLALFFGTSGIIGSVVIA
LAYLRNAGAAMRCAVVVVALMVLIRLIMQPLWLADINAVDTTVVTFPHHPLQALAQLRDIYLLGWCVSAAGMLCFAAGGL
RNARGTLVAGSVLLLIGEIMLRYVFFSIG

Sequences:

>Translated_269_residues
MHELPLLIFTLCLQGSVGVTLWLALGRQYAVEGRVPARGALPAMAGAFVLACVGLLASALHMGYPLNALNALRHVASSWL
SREIVFASLYLAALGLGVVLLFFRKPGWQPLLALAAAFGLVDVFCMAQVYIHASVATWQHSNTLALFFGTSGIIGSVVIA
LAYLRNAGAAMRCAVVVVALMVLIRLIMQPLWLADINAVDTTVVTFPHHPLQALAQLRDIYLLGWCVSAAGMLCFAAGGL
RNARGTLVAGSVLLLIGEIMLRYVFFSIG
>Mature_269_residues
MHELPLLIFTLCLQGSVGVTLWLALGRQYAVEGRVPARGALPAMAGAFVLACVGLLASALHMGYPLNALNALRHVASSWL
SREIVFASLYLAALGLGVVLLFFRKPGWQPLLALAAAFGLVDVFCMAQVYIHASVATWQHSNTLALFFGTSGIIGSVVIA
LAYLRNAGAAMRCAVVVVALMVLIRLIMQPLWLADINAVDTTVVTFPHHPLQALAQLRDIYLLGWCVSAAGMLCFAAGGL
RNARGTLVAGSVLLLIGEIMLRYVFFSIG

Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds. The C Subunit Anchors The Other Two Subunits To The Membrane And Stabilize The Catalytic Subunits (By Similarity). [C]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Integral membrane protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787873, Length=154, Percent_Identity=33.7662337662338, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787123, Length=153, Percent_Identity=34.640522875817, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28674; Mature: 28674

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELPLLIFTLCLQGSVGVTLWLALGRQYAVEGRVPARGALPAMAGAFVLACVGLLASAL
CCCHHHHHHHHHHCCCCHHHHHHHHCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HMGYPLNALNALRHVASSWLSREIVFASLYLAALGLGVVLLFFRKPGWQPLLALAAAFGL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VDVFCMAQVYIHASVATWQHSNTLALFFGTSGIIGSVVIALAYLRNAGAAMRCAVVVVAL
HHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MVLIRLIMQPLWLADINAVDTTVVTFPHHPLQALAQLRDIYLLGWCVSAAGMLCFAAGGL
HHHHHHHHHHHHHHCCCHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNARGTLVAGSVLLLIGEIMLRYVFFSIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHELPLLIFTLCLQGSVGVTLWLALGRQYAVEGRVPARGALPAMAGAFVLACVGLLASAL
CCCHHHHHHHHHHCCCCHHHHHHHHCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HMGYPLNALNALRHVASSWLSREIVFASLYLAALGLGVVLLFFRKPGWQPLLALAAAFGL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VDVFCMAQVYIHASVATWQHSNTLALFFGTSGIIGSVVIALAYLRNAGAAMRCAVVVVAL
HHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MVLIRLIMQPLWLADINAVDTTVVTFPHHPLQALAQLRDIYLLGWCVSAAGMLCFAAGGL
HHHHHHHHHHHHHHCCCHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNARGTLVAGSVLLLIGEIMLRYVFFSIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA