Click here to switch to the map view.

The map label for this gene is 29140838

Identifier: 29140838

GI number: 29140838

Start: 349790

End: 350428

Strand: Direct

Name: 29140838

Synonym: t0304

Alternate gene names: NA

Gene position: 349790-350428 (Clockwise)

Preceding gene: 29140836

Following gene: 29140844

Centisome position: 7.3

GC content: 52.58

Gene sequence:

>639_bases
ATGAAGCCAGTGAAACGCAGCGCCTTAATACTATTTCTCGCCGTTTTATCTTTCGTGGCGGCGGCGCATCCGCACAGCTT
CATCCGTCTGCAAACGCAGGTGGTCAGTGAAAATGAGCAATTTGTGGCGTTAAAAATGCGCTGGACAATGGACGCGCTGA
CGTCCGCCGATCTGCTGTATGACGCCGGAAACGCGGCGCCGGGTTCAGAAATATGGAAAAAGTTGGCGGCGGAAGTGATG
GCTAACGTACTTGGGCAGCACTACTTTACAGAAGTGTGGCGCAATGGCGCGAAAGTGAAGTTTAAAAACAGGCCGACAGA
ATACGGTATGACGCGTGACGCGCATCAGGCGGTATTGACCTTTACGCTGCCGCTGGCTGAACCGCAGCCGTTAAGCGGCC
AGACTTATACCTTTTCAACGTTTGATCCCTCTTATTATGTCGATATGCATTATGACCAGGACAGCGATATCACGATGCCG
GAACCGCTGCGCGAAAAGTGTCGGATTCAGGTTTATACTCCTGCGCCCGGCGAAGAGACGCTACGTTTCGCCCAGTCGCT
GGATAAAGAGGACGCGCCGCCGGAGGATATGGATTTAGGTAAACAGTTTGCCCAAACGGTGACCTTGCAATGTCAGTAA

Upstream 100 bases:

>100_bases
TGGTAAGGATAGCTAAAGTTTGCATGTGAAAAATGTGATAAGTGTGCTTTTAGGCCAGGAATGCTGAGGAGTGTCACAGA
ATTTTTATCGCGAGGAACAG

Downstream 100 bases:

>100_bases
TTTTTTCTCAACGCACTCCGGGGCGACGCTGGCTCTCGCTGTGGCCATTGGCGTTATTCCTGCTGCTGATGCTGGTTGGC
GGTCTGTGGATATGGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKPVKRSALILFLAVLSFVAAAHPHSFIRLQTQVVSENEQFVALKMRWTMDALTSADLLYDAGNAAPGSEIWKKLAAEVM
ANVLGQHYFTEVWRNGAKVKFKNRPTEYGMTRDAHQAVLTFTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDITMP
EPLREKCRIQVYTPAPGEETLRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ

Sequences:

>Translated_212_residues
MKPVKRSALILFLAVLSFVAAAHPHSFIRLQTQVVSENEQFVALKMRWTMDALTSADLLYDAGNAAPGSEIWKKLAAEVM
ANVLGQHYFTEVWRNGAKVKFKNRPTEYGMTRDAHQAVLTFTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDITMP
EPLREKCRIQVYTPAPGEETLRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ
>Mature_212_residues
MKPVKRSALILFLAVLSFVAAAHPHSFIRLQTQVVSENEQFVALKMRWTMDALTSADLLYDAGNAAPGSEIWKKLAAEVM
ANVLGQHYFTEVWRNGAKVKFKNRPTEYGMTRDAHQAVLTFTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDITMP
EPLREKCRIQVYTPAPGEETLRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ

Specific function: Unknown

COG id: COG3683

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010412
- InterPro:   IPR016537 [H]

Pfam domain/function: PF06226 DUF1007 [H]

EC number: NA

Molecular weight: Translated: 23970; Mature: 23970

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVKRSALILFLAVLSFVAAAHPHSFIRLQTQVVSENEQFVALKMRWTMDALTSADLLY
CCCHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHCCCCEEEEEEEEEHHHHHHHHHHHE
DAGNAAPGSEIWKKLAAEVMANVLGQHYFTEVWRNGAKVKFKNRPTEYGMTRDAHQAVLT
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHEEEE
FTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDITMPEPLREKCRIQVYTPAPGEET
EEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHCCCEEEEECCCCCHHH
LRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ
HHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MKPVKRSALILFLAVLSFVAAAHPHSFIRLQTQVVSENEQFVALKMRWTMDALTSADLLY
CCCHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHCCCCEEEEEEEEEHHHHHHHHHHHE
DAGNAAPGSEIWKKLAAEVMANVLGQHYFTEVWRNGAKVKFKNRPTEYGMTRDAHQAVLT
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHEEEE
FTLPLAEPQPLSGQTYTFSTFDPSYYVDMHYDQDSDITMPEPLREKCRIQVYTPAPGEET
EEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHCCCEEEEECCCCCHHH
LRFAQSLDKEDAPPEDMDLGKQFAQTVTLQCQ
HHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]