| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yhjX [H]
Identifier: 29140817
GI number: 29140817
Start: 320152
End: 321348
Strand: Direct
Name: yhjX [H]
Synonym: t0283
Alternate gene names: 29140817
Gene position: 320152-321348 (Clockwise)
Preceding gene: 29140814
Following gene: 29140818
Centisome position: 6.68
GC content: 46.62
Gene sequence:
>1197_bases ATGTCGGCATCAATCAACCGCTGGGGAATGCTTGCCGCTCACGTGTGCATCAATTTTGTGCTCGGGGGCGTCTACGCATT TAGCTATTTCAAAACACCACTCATGGCGCAATATCACTGGGATCCGGCTACGCCGGCGTTAGCATTCTCTATCAATATGG GGATCATTCCTTTACCGATGATTTGGGGCGGGAGAATGATCGACAATGGTAAAGGAAAGCAGGCGATAGTTATCGGCGGT ATCCTGTTTTCTTTAGGTTTTATCTTGTCCGGGTTTGTGGATAATTTGCCCATGCTGTTTTTAACCTACGGCGTCATTGC CGGGTTGGGATCGGGCCTGGCTTTTACGGGTAATCTTAATAATATTCTGAAATTTTTCCCTGACCGTCGCGGTCTTGCCA GCGGTATCGTACTGGCGGGTGTTGGCGTCGGGACGCTACTTTGCACCCGCCTGGCCGAATATTTTATGGCGCAAACTCAC GATGTTAGTCGGGCGTTGTTATATCTGGGTATTGTTTATCTGGTGGTTATTTTTATCGTCCAGTTCTTTATTCGTAGCGC GCCAGCAAAAGATAGCGGAGGAATTAAAGCCTCGCCACTGGATAAAGACTATCGGCACATGCTGAAAGATCTGCGCTTCT GGCTGCTGTTTATGATTCTGGCGCTGGGCGTGTTCTCTGGGATGGTAATTAGCTCAAGTTCTGCGCAAATTGGTATGACG CAGTACGGTTTACTGTCCGGTGCATTAGTCGTTAGCCTGGTCTCGATATTTAACTCGATCGGTCGCCTGTTCTGGGGAGG GTTAACCGATAAATTAGGCGGCTATAATACGCTGGTTATTGTTTATCTTTTTACCTGCGTCTGTATGCTGCTGCTGTTGT TCTTCAACGGTAATACTTCGGTATTCTATTTCAGCGCTCTGGGCGTGGGCTTTGCTTATGCCGGTATATTAGTTATCTTC CTTGGCTTGACCAGCCAGAATTTTGGTATGCGTAACCAGGGACTAAACTACGGCTTTATGTATTTTGGTTTTGCCGTCGG TGCGGTTATTGCTCCTTACGTCACGTCCGCTATTGCAAAATATACCGGAAGCTACAATACAGTATTTATTTTGACAACGG TGCTATTGCTTATTGGAGTCGTGTTGACCCTGATAACGAAAAAATATGTCGCAACGGTTTTAGCCAAAATTCATTAA
Upstream 100 bases:
>100_bases ATCGATTGGGTTTTGTTATAACGATTATAAAAAATACCAAATTGTTTGCCTATTTTGCTTTTTTTAAACTGTGATCAGTG CATTTTAAAAAGGGAAAATT
Downstream 100 bases:
>100_bases TCAGATAATAAGGAAATAAAAATGAAAATTGCAATCGCAGGTGCAGGCGCTATGGGATGTCGTTTTGGCTATATGCTGCT GGAGGCCGGGCACGACGTGA
Product: transmembrane transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATPALAFSINMGIIPLPMIWGGRMIDNGKGKQAIVIGG ILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLNNILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTH DVSRALLYLGIVYLVVIFIVQFFIRSAPAKDSGGIKASPLDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTSVFYFSALGVGFAYAGILVIF LGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAKYTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIH
Sequences:
>Translated_398_residues MSASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATPALAFSINMGIIPLPMIWGGRMIDNGKGKQAIVIGG ILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLNNILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTH DVSRALLYLGIVYLVVIFIVQFFIRSAPAKDSGGIKASPLDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTSVFYFSALGVGFAYAGILVIF LGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAKYTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIH >Mature_397_residues SASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATPALAFSINMGIIPLPMIWGGRMIDNGKGKQAIVIGGI LFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLNNILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTHD VSRALLYLGIVYLVVIFIVQFFIRSAPAKDSGGIKASPLDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMTQ YGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTSVFYFSALGVGFAYAGILVIFL GLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAKYTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI41327156, Length=186, Percent_Identity=31.1827956989247, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI291621700, Length=381, Percent_Identity=25.9842519685039, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI42475555, Length=318, Percent_Identity=24.2138364779874, Blast_Score=65, Evalue=1e-10, Organism=Escherichia coli, GI1789969, Length=360, Percent_Identity=28.6111111111111, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI193209150, Length=394, Percent_Identity=22.3350253807107, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43097; Mature: 42966
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATPALAFSINMGIIPLPM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEEECCCCEECCH IWGGRMIDNGKGKQAIVIGGILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLN HCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH NILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTHDVSRALLYLGIVYLVVIFIV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFIRSAPAKDSGGIKASPLDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHH QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC VFYFSALGVGFAYAGILVIFLGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAK EEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIH HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATPALAFSINMGIIPLPM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEEECCCCEECCH IWGGRMIDNGKGKQAIVIGGILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLN HCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH NILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTHDVSRALLYLGIVYLVVIFIV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFIRSAPAKDSGGIKASPLDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHH QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC VFYFSALGVGFAYAGILVIFLGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAK EEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIH HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]