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The map label for this gene is rseA [H]

Identifier: 29140805

GI number: 29140805

Start: 309850

End: 310500

Strand: Direct

Name: rseA [H]

Synonym: t0271

Alternate gene names: 29140805

Gene position: 309850-310500 (Clockwise)

Preceding gene: 29140804

Following gene: 29140806

Centisome position: 6.47

GC content: 54.22

Gene sequence:

>651_bases
ATGCAGAAAGAAAAACTTTCCGCTTTGATGGATGGCGAAACGTTGGATAGTGAGCTGCTCAAAGCGCTTACGCACGACTC
GGAAATGCAGAAAACCTGGGAGAGTTATCACCTGATCCGCGATTCAATGCGGGGGGATACGCCTGACGTTCTCCATTTCG
ATATATCCGCCCGCGTGATGGCCGCTATTGAAAACGAGCCAGTACGTCAGGTGACGCCATTAATCCCTGAGGCCCAACCC
GCTCCGCAGCAATGGCAGAAAATGCCGTTCTGGAAAAAAGTGCGTCCGTGGGCGGCGCAGCTTACCCAAATGGGCGTGGC
GGCGTGCGTTTCACTTGCAGTTATCGTCGGTGTCCAGCACTATAATGGGCAATCTGAAACATCCCAACAACCTGAAACGC
CGGTTTTCAATACCCTGCCTATGATGGGGAAAGCCAGCCCGGTAAGTCTGGGAGTGCCTTCTGAAGCAGCGCCTGTCGGC
AGTCAGCAACAGCAGGTACAGGAGCAGCGTCGTCGCATTAATGCCATGTTGCAGGACTATGAACTGCAGCGCCGACTGCA
CTCCGAACAGCTTCAGTTTGAGCAGGCGCAAACCCAGCAAGCCGCGGTACAGGTGCCAGGAATCCAAACTTTAGGAACGC
AATCGCAGTAA

Upstream 100 bases:

>100_bases
GTGCGTTCACGTATCTTCCGGGCGCGGGAAGCTATTGATAATAAAGTTCAACCGCTTATCAGGCGTTGACGATAGCGGGA
TACTGGAAAAGGTATTAGGC

Downstream 100 bases:

>100_bases
TGAAGCAACTTTGGTTTGCCATGTCCCTTGTGGCGGCTAGCCTGTTCTTCTCAGTAAACGCCTCGGCCGACCCTGCGTCC
GGGGCGTTATTGCAGCAGAT

Product: anti-RNA polymerase sigma factor SigE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MQKEKLSALMDGETLDSELLKALTHDSEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVTPLIPEAQP
APQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVG
SQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ

Sequences:

>Translated_216_residues
MQKEKLSALMDGETLDSELLKALTHDSEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVTPLIPEAQP
APQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVG
SQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
>Mature_216_residues
MQKEKLSALMDGETLDSELLKALTHDSEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVTPLIPEAQP
APQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVG
SQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=216, Percent_Identity=91.2037037037037, Blast_Score=355, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 24227; Mature: 24227

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEKLSALMDGETLDSELLKALTHDSEMQKTWESYHLIRDSMRGDTPDVLHFDISARVM
CCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH
AAIENEPVRQVTPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQH
HHHCCCCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDY
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQKEKLSALMDGETLDSELLKALTHDSEMQKTWESYHLIRDSMRGDTPDVLHFDISARVM
CCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH
AAIENEPVRQVTPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQH
HHHCCCCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDY
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]