Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is fabZ [H]
Identifier: 29140767
GI number: 29140767
Start: 263409
End: 263864
Strand: Direct
Name: fabZ [H]
Synonym: t0228
Alternate gene names: 29140767
Gene position: 263409-263864 (Clockwise)
Preceding gene: 29140766
Following gene: 29140768
Centisome position: 5.5
GC content: 52.19
Gene sequence:
>456_bases TTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAGCTTCTGCCGCACCGTTTTCCGTTTTTACTGGTCGA TCGCGTGCTGGACTTTGAAGAAGGTCGTTTTCTGCGTGCGGTGAAAAATGTCTCCGTCAACGAGCCGTTTTTCCAGGGGC ATTTCCCGGGCAAACCGATTTTGCCAGGCGTGCTGATTCTGGAAGCGATGGCGCAGGCAACCGGTATTCTGGCGTTTAAA AGCGTTGGTAAACTGGAACCTGGCGAACTGTATTATTTCGCGGGTATTGATGAAGCGCGCTTTAAGCGTCCGGTGGTGCC AGGCGATCAGATGATCATGGAAGTCACTTTCGAGAAAACGCGCCGTGGCCTGACCCGCTTTAAAGGGGTTGCGCTGGTCG ACGGTAAAGTTGTGTGCGAAGCAACCATGATGTGTGCTCGTAGCCGGGAGGCCTGA
Upstream 100 bases:
>100_bases CGCCTTGTAGTTGCCATTCTTTTCCGGCCTGTCACATTCATACGATTGCGGCAGGCCGTGTTATTATTGCCTTTTTGTAT ATTTGGACAGGAAGAGTATT
Downstream 100 bases:
>100_bases TTCGTGATTGATAAATCCGTCTTTATTCATCCTACCGCCATTGTGGAAGACGGCGCTGTAATTGGCGCTAATGCCCACAT TGGTCCCTTTTGTATTGTTG
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA
Sequences:
>Translated_151_residues MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFK SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA >Mature_150_residues TTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPILPGVLILEAMAQATGILAFKS VGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=151, Percent_Identity=99.3377483443709, Blast_Score=305, Evalue=7e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 16999; Mature: 16868
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPI CCCCCCEEEHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC LPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKT CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHH RRGLTRFKGVALVDGKVVCEATMMCARSREA HHHHHHHCCEEEECCHHHHHHHHHHHHCCCC >Mature Secondary Structure TTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPI CCCCCEEEHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC LPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKT CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHH RRGLTRFKGVALVDGKVVCEATMMCARSREA HHHHHHHCCEEEECCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA