Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yadR [H]
Identifier: 29140745
GI number: 29140745
Start: 237118
End: 237507
Strand: Direct
Name: yadR [H]
Synonym: t0205
Alternate gene names: 29140745
Gene position: 237118-237507 (Clockwise)
Preceding gene: 29140744
Following gene: 29140749
Centisome position: 4.95
GC content: 48.72
Gene sequence:
>390_bases TTGGGTGAAAATTTATCCAATTACCGATGTCGTTTGGAGCAAAATATGAGTGATGACGTAGCGCTGCCGCTGCAGTTTAC CGACGCAGCAGCGAATAAAGTAAAAAGTCTTATCGCTGACGAAGATAACCCGAATCTGAAACTGCGCGTGTATATCACCG GCGGTGGTTGCAGCGGCTTCCAGTATGGTTTTACCTTTGACGATCAGGTTAACGAAGGGGATATGACCATCGAAAAACAG GGCGTTGGCCTGGTGGTTGACCCGATGAGTTTGCAGTATCTGGTGGGTGGTTCGGTAGATTATACCGAAGGTCTGGAAGG TTCCCGCTTCATTGTAACCAACCCGAATGCGAAAAGTACCTGCGGGTGTGGCTCTTCCTTCAGCATTTGA
Upstream 100 bases:
>100_bases GGCGAAGCAGGATGCGGAACAGGCGGCGAAAAACCAGAATGCGCCTGCGGGCGAGAATACTTGAACGAATTACCAGGGTA TTAGATAATGACTGCCAATA
Downstream 100 bases:
>100_bases TTGCTGTTCGTTGTGCCGGATGGCGACGCGAGCGTCTTATCCGGCCTACAGGAAAGATGTTCCAGGCCCGATAAGCGTAG CGCCATCGGGCAAAACAATA
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGENLSNYRCRLEQNMSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQ GVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI
Sequences:
>Translated_129_residues MGENLSNYRCRLEQNMSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQ GVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI >Mature_128_residues GENLSNYRCRLEQNMSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQG VGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=46.9879518072289, Blast_Score=80, Evalue=6e-16, Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=33.0188679245283, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1786351, Length=114, Percent_Identity=99.1228070175439, Blast_Score=231, Evalue=8e-63, Organism=Escherichia coli, GI1788877, Length=110, Percent_Identity=40, Blast_Score=75, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=40.7407407407407, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25146411, Length=107, Percent_Identity=31.7757009345794, Blast_Score=74, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=31.7757009345794, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=5e-14, Organism=Drosophila melanogaster, GI24649697, Length=109, Percent_Identity=40.3669724770642, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24642263, Length=107, Percent_Identity=34.5794392523364, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13909; Mature: 13777
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENLSNYRCRLEQNMSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGF CCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC QYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKST CCCCEECCCCCCCCEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCC CGCGSSFSI CCCCCCCCC >Mature Secondary Structure GENLSNYRCRLEQNMSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGF CCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC QYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKST CCCCEECCCCCCCCEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCC CGCGSSFSI CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA