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The map label for this gene is staA [H]

Identifier: 29140731

GI number: 29140731

Start: 216818

End: 217402

Strand: Reverse

Name: staA [H]

Synonym: t0190

Alternate gene names: 29140731

Gene position: 217402-216818 (Counterclockwise)

Preceding gene: 29140732

Following gene: 29140730

Centisome position: 4.54

GC content: 47.86

Gene sequence:

>585_bases
ATGAAAAAAGCGATTTTAGCTGCCGCAATGGTTATGGCTATGGGTTCTACTTCCGCAATGGCAGTTGAAGGCGGCCAGAT
CGAATTCCACGGTTTAGTGAGCGCAACAACCTGTTCTAAAGTAGTTTCCTCTTCACGCGGTAATCAAGCGACTGATGGTG
ACGTATATCTGACTACAGCAGCCCCAGGCGATATCACTGAAGGCGTTGCTGCTAACGCATACGGCGCGCTTCCGGCTCCG
TTCTCTATCATCCTGGATTGCTCAGGCGCGGCTGATGTAACTGATGCCACTAAGGCTTCTCTGGTAATGGATTCGTCATT
CTCTAACACTACCGGCACTCTTGACAATGACACCACACTGTCCGTGGCTGGTGAAACTGGGGCTGAAAACGTGAATATCG
CCATCCATGATGCCGATACCAAAACTCAGGTTAAAATCGATGGCGCTGAAATTCATGAAGCGTCCTTCAAAAACAAAGTT
GCAACCTATAACTTTATGGCGTCTTACGTTCGTGCCGATGCTTCTAAAGAAGTGACTACCGGTCATGTAACCACGAACGC
AATGTATACCTTTACTTACCAGTAA

Upstream 100 bases:

>100_bases
ACAAAAATTATCCTCAAACGCTAAAATCCAAGCCCTGCTATTTAATATAAATTAATAGATATTTAATTTATTAACATTTC
AATCCTGTAAGGATACAGCA

Downstream 100 bases:

>100_bases
CAGGACATACGGTTATCACTAATAAGTACTCGTACCTTTCCTTGAGTTAGCGTGCTTATCAGTTATTGATCTCATATAAC
CTTCGGGGTCCAGGAATTAT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKKAILAAAMVMAMGSTSAMAVEGGQIEFHGLVSATTCSKVVSSSRGNQATDGDVYLTTAAPGDITEGVAANAYGALPAP
FSIILDCSGAADVTDATKASLVMDSSFSNTTGTLDNDTTLSVAGETGAENVNIAIHDADTKTQVKIDGAEIHEASFKNKV
ATYNFMASYVRADASKEVTTGHVTTNAMYTFTYQ

Sequences:

>Translated_194_residues
MKKAILAAAMVMAMGSTSAMAVEGGQIEFHGLVSATTCSKVVSSSRGNQATDGDVYLTTAAPGDITEGVAANAYGALPAP
FSIILDCSGAADVTDATKASLVMDSSFSNTTGTLDNDTTLSVAGETGAENVNIAIHDADTKTQVKIDGAEIHEASFKNKV
ATYNFMASYVRADASKEVTTGHVTTNAMYTFTYQ
>Mature_194_residues
MKKAILAAAMVMAMGSTSAMAVEGGQIEFHGLVSATTCSKVVSSSRGNQATDGDVYLTTAAPGDITEGVAANAYGALPAP
FSIILDCSGAADVTDATKASLVMDSSFSNTTGTLDNDTTLSVAGETGAENVNIAIHDADTKTQVKIDGAEIHEASFKNKV
ATYNFMASYVRADASKEVTTGHVTTNAMYTFTYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786334, Length=194, Percent_Identity=37.1134020618557, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19986; Mature: 19986

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAILAAAMVMAMGSTSAMAVEGGQIEFHGLVSATTCSKVVSSSRGNQATDGDVYLTTA
CCHHHHHHHHHHHCCCCCEEEEECCEEEEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEC
APGDITEGVAANAYGALPAPFSIILDCSGAADVTDATKASLVMDSSFSNTTGTLDNDTTL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEE
SVAGETGAENVNIAIHDADTKTQVKIDGAEIHEASFKNKVATYNFMASYVRADASKEVTT
EEECCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEE
GHVTTNAMYTFTYQ
CEEEECEEEEEEEC
>Mature Secondary Structure
MKKAILAAAMVMAMGSTSAMAVEGGQIEFHGLVSATTCSKVVSSSRGNQATDGDVYLTTA
CCHHHHHHHHHHHCCCCCEEEEECCEEEEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEC
APGDITEGVAANAYGALPAPFSIILDCSGAADVTDATKASLVMDSSFSNTTGTLDNDTTL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEE
SVAGETGAENVNIAIHDADTKTQVKIDGAEIHEASFKNKVATYNFMASYVRADASKEVTT
EEECCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEE
GHVTTNAMYTFTYQ
CEEEECEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]