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The map label for this gene is yadE [H]

Identifier: 29140721

GI number: 29140721

Start: 206666

End: 207889

Strand: Direct

Name: yadE [H]

Synonym: t0180

Alternate gene names: 29140721

Gene position: 206666-207889 (Clockwise)

Preceding gene: 29140720

Following gene: 161486817

Centisome position: 4.31

GC content: 49.92

Gene sequence:

>1224_bases
ATGCGTGTTGTTCTTATCTTGCTGTTCTTTTTCGCCGGTAATGTGTTGGCTGCCTTGCCCGCTCGTTATATGCAAACGAC
GAAAGATGCCGCCATCTGGTCGCAGATTGGCGACAAAATGGTGACCGTAGGGAATATCCGCGCCGGACAAATTCTTTCCG
TAACGCCTGTTGCGGTTGATTATTATGCCTTTAAATTTGGCTTCGGTGTGGGGTTTATCGATAAAGGCCATCTGGGACCC
GTGCAGGGAAAACAAAAAGTGGAAGATGGGCTGGGCGATCTTAACAAGCCGCTCAGCAATCAGAATCTGGTGACCTGGAA
GGACACGCCGGTGTATAACGCGCCGGACATCAGTAGCGCCCCGTTTGGCGTATTGGTGGATAATTTGCGTTACCCCATTA
TTAGCAAGCTGAAAGGCCGGCTACATCAAACCTGGAATCAGATCCGTATTGGCGACAGGCTGGCTTATGTCAACGCCATG
GATGCGCAGGAAGACAACGGCATTCCGATTTTGACCTATCATCACATTTTACGTGATGAAGAGAATACCCGTTTTCGCCA
TACCTCCACCACGACTTCGGTTCGGGCATTCAGCAACCAAATGACCTGGCTTCGCGATCGCGGCTATGCCACGTTGACGA
TGTACCAACTGGAGGATTACATCTATAACCGCGCTAATTTCCCGGCGCGCGCGGTGGCTATCACCTTTGATGATGGCCTT
AAATCGGTGAGTCGCTATGCATATCCGGTATTAAAGCAGTACGATATGAAAGCGACGGCATTTATTATCTCATCGCGTAT
TAAGCGCCATCCGCAAAAATGGAATCCCAGGTCGCTGCAATTTATGAGCGTGTCCGAATTGCGCAAGATAAGCGATGTTT
TTGATTTTCAGTCGCATACCCATTTTTTACACCGGGTAGACGGGCATCGCCGCCCGATTTTATATAGCCGCAGTTACCAT
AATATTCTGTTTGATTTTGAACGTTCGCGGCGGGCGCTCACACAGTTTACTCCGCACGTATTTTATCTTTCTTATCCCTT
TGGCGGCTATAACGCGACCGCGATCAAAGCAGCAAAAGACGCCGGTTTCCATCTGGCGGTCACCACGGTGAGAGGGAAGG
TGAAGCCGGGAGATAATCCGATGCTGCTCAAAAGGCTGTATATTTTACGCACGGATTCGCTGGAAACGATGTCGCGGCTG
ATAGTCAATCAGCCGCAGGGGTAA

Upstream 100 bases:

>100_bases
TTTGTATTGCTGCATGATTTGTATGAGTTTTGATCAATACCATTGACGACGCTTTTGCTACAATAACGGCGTTTTTTCGC
CTCGGTTATGATATATGGTT

Downstream 100 bases:

>100_bases
GGACTATCAGGCAACCTGAACCGGAATGGCTTTCGCGGTGCGCTTCATTTCGTTGTCGCCTTCAAAGTAGGCCACTTTCG
GACGCCATGTACGCGCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRVVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAVDYYAFKFGFGVGFIDKGHLGP
VQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLKGRLHQTWNQIRIGDRLAYVNAM
DAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIYNRANFPARAVAITFDDGL
KSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRSYH
NILFDFERSRRALTQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRL
IVNQPQG

Sequences:

>Translated_407_residues
MRVVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAVDYYAFKFGFGVGFIDKGHLGP
VQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLKGRLHQTWNQIRIGDRLAYVNAM
DAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIYNRANFPARAVAITFDDGL
KSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRSYH
NILFDFERSRRALTQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRL
IVNQPQG
>Mature_407_residues
MRVVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAVDYYAFKFGFGVGFIDKGHLGP
VQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLKGRLHQTWNQIRIGDRLAYVNAM
DAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIYNRANFPARAVAITFDDGL
KSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRSYH
NILFDFERSRRALTQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRL
IVNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=406, Percent_Identity=81.2807881773399, Blast_Score=705, Evalue=0.0,
Organism=Escherichia coli, GI1787260, Length=267, Percent_Identity=22.8464419475655, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46525; Mature: 46525

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCHHHH
YYAFKFGFGVGFIDKGHLGPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSA
HEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
PFGVLVDNLRYPIISKLKGRLHQTWNQIRIGDRLAYVNAMDAQEDNGIPILTYHHILRDE
CHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEEHHHHCCC
ENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIYNRANFPARAVAITFDDGL
CCCEEEECCCCHHHHHHHHCHHHHHCCCCEEEEEEEHHHHHHCCCCCCEEEEEEEECHHH
KSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH
HFLHRVDGHRRPILYSRSYHNILFDFERSRRALTQFTPHVFYLSYPFGGYNATAIKAAKD
HHHHHCCCCCCCEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCC
AGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRLIVNQPQG
CCEEEEEEEEECEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MRVVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCHHHH
YYAFKFGFGVGFIDKGHLGPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSA
HEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
PFGVLVDNLRYPIISKLKGRLHQTWNQIRIGDRLAYVNAMDAQEDNGIPILTYHHILRDE
CHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEEHHHHCCC
ENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIYNRANFPARAVAITFDDGL
CCCEEEECCCCHHHHHHHHCHHHHHCCCCEEEEEEEHHHHHHCCCCCCEEEEEEEECHHH
KSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH
HFLHRVDGHRRPILYSRSYHNILFDFERSRRALTQFTPHVFYLSYPFGGYNATAIKAAKD
HHHHHCCCCCCCEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCC
AGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRLIVNQPQG
CCEEEEEEEEECEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]