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The map label for this gene is araB [H]

Identifier: 29140648

GI number: 29140648

Start: 120996

End: 122705

Strand: Reverse

Name: araB [H]

Synonym: t0107

Alternate gene names: 29140648

Gene position: 122705-120996 (Counterclockwise)

Preceding gene: 29140651

Following gene: 29140647

Centisome position: 2.56

GC content: 60.58

Gene sequence:

>1710_bases
ATGGCAATTGCAATTGGCCTCGATTTTGGCAGTGATTCAGTGCGCGCTCTGGCAGTGGACTGCGCCACCGGCGACGAGAT
CGCCACCAGCGTAGAGTGGTATCTGCGCTGGCAAGAAGGCCGTTATTGCGACGGCCCGAACAACCAGTTCCGTCATCATC
CGCGCGACTACATGGAGTCAATGGAGGCCGCGCTGAAAGCCGTTCTGGCACAATTAAGCGCCGCGCAACGCGCAAATGTC
GTTGGCATTGGCGTTGACAGCACCGGTTCTACGCCAGCGCCGATTGACGCCGACGGTAACGTCCTGGCGCTGCGTCCGGA
GTTCGCCGAGAACCCGAATGCGATGTTTGTGCTGTGGAAAGATCACACCGCCGTGGAAGAAGCCGACGAAATCACTCGTC
TGTGCCATAAGCCAGGTAAGGTCGACTACTCCCGCTATATTGGCGGCATTTACTCCAGCGAATGGTTCTGGGCGAAGATT
CTGCACGTCACCCGCCAGGATAGCGCCGTCGCGCAGGCCGCCGTCTCGTGGATTGAACTGTGTGACTGGGTGCCGGCGCT
GCTTTCCGGCACCACTCGCCCGCAGGATATCCGCCGTGGCCGCTGCAGCGCTGGGCACAAAACACTGTGGCATGAAAGCT
GGGGCGGTCTGCCGCCCGCGAGCTTCTTTGATGAACTCGATCCGTGCATTAACCGTCATCTGCGCTACCCGTTATTTAGC
GAAACCTTCACCGCCGATCTGCCCGTGGGCACCCTGTGCGCCGAATGGGCGCAGCGCCTCGGCTTGCCGGAAAGCGTGGT
GATTTCCGGCGGCGCGTTCGACTGTCACATGGGCGCGGTCGGCGCGGGCGCACAGCCCAATACGCTGGTAAAAGTCATCG
GCACGTCAACCTGCGACATTCTGATTGCGGATAAACAGAGCGTCGGGGATCGCGCCGTGAAAGGCATTTGCGGTCAGGTT
GACGGCAGCGTGGTGCCGAACTTTATCGGTCTGGAAGCGGGCCAGTCCGCTTTCGGCGACATCTACGCCTGGTTTAGCCG
CGTGTTGAGCTGGCCGCTGGAACAACTTGCCGCGCAGCACCCGGAACTGAAAACCCAGATTAACGCCAGCCAGAAGCAGC
TATTGCCAGCGCTCACCGACGCCTGGGCGAAAAATCCGTCCCTGGATCACCTGCCGGTGGTGCTCGACTGGTTCAATGGT
CGCCGTACACCCAATGCCAACCAGCGTCTGAAAGGCGTCATTACCGATCTCAATCTCGCCACCGACGCGCCAGCGCTGTT
TGGCGGTCTGGTCGCCTCGACCGCCTTCGGCGCGCGCGCCATTCAGGAGTGTTTTACCGAGCAGGGTATCGCGGTCAATA
ACGTGATGGCGCTTGGCGGCATCGCCCGTAAAAATCAGGTCATTATGCAGGTCTGCTGCGACGTACTGAATCGTCCGTTG
CAGATCGTCGCTTCCGACCAATGTTGCGCATTAGGCGCCGCTATCTTTGCCGCCGTTGCCGCGAAAGTCCATGCCGATAT
TCCTGCCGCCCAGCAAAGCATGGCGAGCGCGGTAGAACGCACTCTGCGTCCCCGCCCTGAACAGGCGCAACGCTTCGAAC
GGCTTTACCGCCGCTACCAGCAGTGGGCGCTAAGCGCAGAACAACATTATCTTCCGACTGCCGCGCCGGCGCCAACGACC
CCGGCCAATCAGGCAATCCTGACTCATTAA

Upstream 100 bases:

>100_bases
TTAGCATTTTTGTCCATAAGATTAGCGGATCCTGCCTGACGGTTTTTGCCGCGACTCTCTACTGTTTCTCCATACCTGTT
TTTCTGGATGGAGTAAGACG

Downstream 100 bases:

>100_bases
GGACACGACAATGACGATTTTTGATAATTATGAAGTATGGTTTGTGATTGGCAGCCAGCATTTGTATGGCGCAGAAACCC
TGCGCCAGGTCACCCAACAT

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MAIAIGLDFGSDSVRALAVDCATGDEIATSVEWYLRWQEGRYCDGPNNQFRHHPRDYMESMEAALKAVLAQLSAAQRANV
VGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEADEITRLCHKPGKVDYSRYIGGIYSSEWFWAKI
LHVTRQDSAVAQAAVSWIELCDWVPALLSGTTRPQDIRRGRCSAGHKTLWHESWGGLPPASFFDELDPCINRHLRYPLFS
ETFTADLPVGTLCAEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNTLVKVIGTSTCDILIADKQSVGDRAVKGICGQV
DGSVVPNFIGLEAGQSAFGDIYAWFSRVLSWPLEQLAAQHPELKTQINASQKQLLPALTDAWAKNPSLDHLPVVLDWFNG
RRTPNANQRLKGVITDLNLATDAPALFGGLVASTAFGARAIQECFTEQGIAVNNVMALGGIARKNQVIMQVCCDVLNRPL
QIVASDQCCALGAAIFAAVAAKVHADIPAAQQSMASAVERTLRPRPEQAQRFERLYRRYQQWALSAEQHYLPTAAPAPTT
PANQAILTH

Sequences:

>Translated_569_residues
MAIAIGLDFGSDSVRALAVDCATGDEIATSVEWYLRWQEGRYCDGPNNQFRHHPRDYMESMEAALKAVLAQLSAAQRANV
VGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEADEITRLCHKPGKVDYSRYIGGIYSSEWFWAKI
LHVTRQDSAVAQAAVSWIELCDWVPALLSGTTRPQDIRRGRCSAGHKTLWHESWGGLPPASFFDELDPCINRHLRYPLFS
ETFTADLPVGTLCAEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNTLVKVIGTSTCDILIADKQSVGDRAVKGICGQV
DGSVVPNFIGLEAGQSAFGDIYAWFSRVLSWPLEQLAAQHPELKTQINASQKQLLPALTDAWAKNPSLDHLPVVLDWFNG
RRTPNANQRLKGVITDLNLATDAPALFGGLVASTAFGARAIQECFTEQGIAVNNVMALGGIARKNQVIMQVCCDVLNRPL
QIVASDQCCALGAAIFAAVAAKVHADIPAAQQSMASAVERTLRPRPEQAQRFERLYRRYQQWALSAEQHYLPTAAPAPTT
PANQAILTH
>Mature_568_residues
AIAIGLDFGSDSVRALAVDCATGDEIATSVEWYLRWQEGRYCDGPNNQFRHHPRDYMESMEAALKAVLAQLSAAQRANVV
GIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEADEITRLCHKPGKVDYSRYIGGIYSSEWFWAKIL
HVTRQDSAVAQAAVSWIELCDWVPALLSGTTRPQDIRRGRCSAGHKTLWHESWGGLPPASFFDELDPCINRHLRYPLFSE
TFTADLPVGTLCAEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNTLVKVIGTSTCDILIADKQSVGDRAVKGICGQVD
GSVVPNFIGLEAGQSAFGDIYAWFSRVLSWPLEQLAAQHPELKTQINASQKQLLPALTDAWAKNPSLDHLPVVLDWFNGR
RTPNANQRLKGVITDLNLATDAPALFGGLVASTAFGARAIQECFTEQGIAVNNVMALGGIARKNQVIMQVCCDVLNRPLQ
IVASDQCCALGAAIFAAVAAKVHADIPAAQQSMASAVERTLRPRPEQAQRFERLYRRYQQWALSAEQHYLPTAAPAPTTP
ANQAILTH

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=581, Percent_Identity=25.8175559380379, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI164663830, Length=605, Percent_Identity=24.7933884297521, Blast_Score=92, Evalue=9e-19,
Organism=Escherichia coli, GI1786249, Length=554, Percent_Identity=91.3357400722022, Blast_Score=1039, Evalue=0.0,
Organism=Drosophila melanogaster, GI24657106, Length=576, Percent_Identity=25.1736111111111, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24657102, Length=576, Percent_Identity=25.1736111111111, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21356323, Length=459, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 61776; Mature: 61644

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAIGLDFGSDSVRALAVDCATGDEIATSVEWYLRWQEGRYCDGPNNQFRHHPRDYMES
CEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHH
MEAALKAVLAQLSAAQRANVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCHHCCCCCEEEEEEC
DHTAVEEADEITRLCHKPGKVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQAAVSWIEL
CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
CDWVPALLSGTTRPQDIRRGRCSAGHKTLWHESWGGLPPASFFDELDPCINRHLRYPLFS
HHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ETFTADLPVGTLCAEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNTLVKVIGTSTCDI
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEECCCCEEE
LIADKQSVGDRAVKGICGQVDGSVVPNFIGLEAGQSAFGDIYAWFSRVLSWPLEQLAAQH
EEECCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PELKTQINASQKQLLPALTDAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA
CCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCC
TDAPALFGGLVASTAFGARAIQECFTEQGIAVNNVMALGGIARKNQVIMQVCCDVLNRPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
QIVASDQCCALGAAIFAAVAAKVHADIPAAQQSMASAVERTLRPRPEQAQRFERLYRRYQ
EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QWALSAEQHYLPTAAPAPTTPANQAILTH
HHHHCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIAIGLDFGSDSVRALAVDCATGDEIATSVEWYLRWQEGRYCDGPNNQFRHHPRDYMES
EEEEEECCCCCCCEEEEEECCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHH
MEAALKAVLAQLSAAQRANVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCHHCCCCCEEEEEEC
DHTAVEEADEITRLCHKPGKVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQAAVSWIEL
CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
CDWVPALLSGTTRPQDIRRGRCSAGHKTLWHESWGGLPPASFFDELDPCINRHLRYPLFS
HHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ETFTADLPVGTLCAEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNTLVKVIGTSTCDI
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEECCCCEEE
LIADKQSVGDRAVKGICGQVDGSVVPNFIGLEAGQSAFGDIYAWFSRVLSWPLEQLAAQH
EEECCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PELKTQINASQKQLLPALTDAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA
CCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCC
TDAPALFGGLVASTAFGARAIQECFTEQGIAVNNVMALGGIARKNQVIMQVCCDVLNRPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
QIVASDQCCALGAAIFAAVAAKVHADIPAAQQSMASAVERTLRPRPEQAQRFERLYRRYQ
EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QWALSAEQHYLPTAAPAPTTPANQAILTH
HHHHCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA