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The map label for this gene is yrkD [H]

Identifier: 28563943

GI number: 28563943

Start: 2720272

End: 2720538

Strand: Reverse

Name: yrkD [H]

Synonym: OB2653

Alternate gene names: 28563943

Gene position: 2720538-2720272 (Counterclockwise)

Preceding gene: 23100109

Following gene: 23100107

Centisome position: 74.94

GC content: 35.58

Gene sequence:

>267_bases
ATGATTATGGACTACGATGTTCAAACTAAAAATAGATTAAAACGAATTGAAGGACAACTTCGGGGAGTATTGAAGATGAT
GGAAGAAGAAAAAGAATGTAAAGATATTATTACTCAGTTGTCGGCAAGTCGTACTGCTATTGACCGTACGATTGGTGTAT
TAGTTAGTACGAACTTGATAGAGTGTGTTAGAAACGCAGAAGAACGTGGTGAGGATAGTGATGAACTAGTAAAAGAAGCT
GTCAACATGCTTGTAAAAAGTAGATAA

Upstream 100 bases:

>100_bases
TGATCTAGTCCCAAGGTATAAATTATTCATTTGACATTATACCTATAGGGGTATAAAATATAGGCTAACGTCACCATAAT
ATAGAAGTGAAGGAGGGATA

Downstream 100 bases:

>100_bases
TAAAAAAGGTTGACAGCTCCTTTTTTTACCTATATTATATACCTGTACGGGTATTGGTAATGGAAATTAAATGTTACCTC
ATTTACTCGTTTTTTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MIMDYDVQTKNRLKRIEGQLRGVLKMMEEEKECKDIITQLSASRTAIDRTIGVLVSTNLIECVRNAEERGEDSDELVKEA
VNMLVKSR

Sequences:

>Translated_88_residues
MIMDYDVQTKNRLKRIEGQLRGVLKMMEEEKECKDIITQLSASRTAIDRTIGVLVSTNLIECVRNAEERGEDSDELVKEA
VNMLVKSR
>Mature_88_residues
MIMDYDVQTKNRLKRIEGQLRGVLKMMEEEKECKDIITQLSASRTAIDRTIGVLVSTNLIECVRNAEERGEDSDELVKEA
VNMLVKSR

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10086; Mature: 10086

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMDYDVQTKNRLKRIEGQLRGVLKMMEEEKECKDIITQLSASRTAIDRTIGVLVSTNLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECVRNAEERGEDSDELVKEAVNMLVKSR
HHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIMDYDVQTKNRLKRIEGQLRGVLKMMEEEKECKDIITQLSASRTAIDRTIGVLVSTNLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECVRNAEERGEDSDELVKEAVNMLVKSR
HHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]