Click here to switch to the map view.

The map label for this gene is 28378913

Identifier: 28378913

GI number: 28378913

Start: 2109481

End: 2109945

Strand: Direct

Name: 28378913

Synonym: lp_2333

Alternate gene names: NA

Gene position: 2109481-2109945 (Clockwise)

Preceding gene: 28378911

Following gene: 28378917

Centisome position: 63.76

GC content: 46.45

Gene sequence:

>465_bases
ATGGCTGAAACAGATAAGCAACCAGTTGACCGCATCGAAACGGCCATGCACGGGACGCCAAAGTTGCATCCCGACGAACA
ACGCAAGTACCTGGGGACCTTTCGGGAACGCGTCGAAGTCGCAGTGACCGTTGCCCAAATTAAACAGGCCAATTACGTCG
ACGCACTTAATCAAGCATTTACGAGCCATCCGGATGACCAATTATATATTAATGGTAATTTAGACCAGGAACTGATTGGG
CCGTATATCAAGGCGGCTAGTCAAGCCAATATCAAATTCACTATCAAAACGGATGACATCTACCATACTGCTGATGATGA
TTACGCGCTTGTCTTCACTGCTGCAAGCGCCATTAACCAAGATATTATTGATGTTGCGCAGCGATATCCCTCGCAGACTT
CATCAGCAACACCCCAGGCCGAGAAAACACCTGGGTTGCTAGATAAATTCAAAAAGTTACTTTAA

Upstream 100 bases:

>100_bases
CCATACCGCACTCACTAACGCAACGCTACCCCCTTCCCTTCGCTATTATTGGAGGAACATGCTACAATGATAATTATTAT
CAAGGAAAGGATGTTAGACA

Downstream 100 bases:

>100_bases
TACAACAAAGGTCCCCATCCACGCACGGATGAGGACCTTTTTACGTTTGACTGCGTTAATTACGCGCTAGAGTGCCATAA
AGACTCATGATAACTAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MAETDKQPVDRIETAMHGTPKLHPDEQRKYLGTFRERVEVAVTVAQIKQANYVDALNQAFTSHPDDQLYINGNLDQELIG
PYIKAASQANIKFTIKTDDIYHTADDDYALVFTAASAINQDIIDVAQRYPSQTSSATPQAEKTPGLLDKFKKLL

Sequences:

>Translated_154_residues
MAETDKQPVDRIETAMHGTPKLHPDEQRKYLGTFRERVEVAVTVAQIKQANYVDALNQAFTSHPDDQLYINGNLDQELIG
PYIKAASQANIKFTIKTDDIYHTADDDYALVFTAASAINQDIIDVAQRYPSQTSSATPQAEKTPGLLDKFKKLL
>Mature_153_residues
AETDKQPVDRIETAMHGTPKLHPDEQRKYLGTFRERVEVAVTVAQIKQANYVDALNQAFTSHPDDQLYINGNLDQELIGP
YIKAASQANIKFTIKTDDIYHTADDDYALVFTAASAINQDIIDVAQRYPSQTSSATPQAEKTPGLLDKFKKLL

Specific function: Unknown

COG id: COG5506

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17211; Mature: 17080

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETDKQPVDRIETAMHGTPKLHPDEQRKYLGTFRERVEVAVTVAQIKQANYVDALNQAF
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSHPDDQLYINGNLDQELIGPYIKAASQANIKFTIKTDDIYHTADDDYALVFTAASAINQ
HCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCEEEEEEHHHHHHH
DIIDVAQRYPSQTSSATPQAEKTPGLLDKFKKLL
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
>Mature Secondary Structure 
AETDKQPVDRIETAMHGTPKLHPDEQRKYLGTFRERVEVAVTVAQIKQANYVDALNQAF
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSHPDDQLYINGNLDQELIGPYIKAASQANIKFTIKTDDIYHTADDDYALVFTAASAINQ
HCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCEEEEEEHHHHHHH
DIIDVAQRYPSQTSSATPQAEKTPGLLDKFKKLL
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA