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The map label for this gene is ybhE [C]

Identifier: 28378817

GI number: 28378817

Start: 2001818

End: 2002837

Strand: Direct

Name: ybhE [C]

Synonym: lp_2219

Alternate gene names: 28378817

Gene position: 2001818-2002837 (Clockwise)

Preceding gene: 28378814

Following gene: 28378818

Centisome position: 60.51

GC content: 49.02

Gene sequence:

>1020_bases
ATGCAAGAACGCATTTTATTCGGAACATATACGAAAAAAACAAGCCAAGGGATTTACCAAGGAACCCTTGACACCACTGC
CAAAACCTTAACCAACGATGGCTTACTGGCAGCCACTCAAAATCCCACCTATTTGGCCCTCTCAGCTAAGGATTGCCTAT
ACAGTGTCGATAAGGAAGATGACGAGGGCGGTATCGCTGCTTGGCAAATCGACGGGCAAACTGCTCACAAACTAAACACC
GTTGTCGCACCTGGCACCCCACCAGCTTACGTTGCTGTCGATGAGGCCCGGCAACTCGTCTACAGTGCCAACTATCATAA
GGGAACGGCCGAAGTCATGAAAATTGCTGCTGATGGCGCGCTGACTTTGACCGATACTGTTCAACATAGTGGTCATGGCC
CTCGTCCTGAACAAGACGGCTCCCATATTCATTACACCGACCTCACGCCAGATAATCGCTTAGCCGTAATCGATTTAGGT
AGCGATAAGGTCTATGTCTATAACGTCAGCGACGCCGGTCAGTTAAGTGAACAATCCGTGCTCACTATGGAAGCTGGTTT
TGGACCACGTCACCTCGTGTTCAGTCCAGACGGCCAATACGCCTTCTTAGCTGGTGAATTATCGAGTCAGATTGCGAGCT
TAAAATATGACGCCCAAACTGGTGCCTTTACGCAGCTTGGCATTGTGAAGACCATTCCTGCCGACTACACGGCGCACAAC
GGTGCCGCAGCCATCCGCTTAAGTCACGACGGTCATTTTCTCTACGTCTCCAATCGTGGCTACAATACGTTAGCTGTCTT
TGCAGTAACCGCCGACGGTCATTTGACCCTGATTCAGCAAATCAGTACGGAAGGTGACTTCCCCCGTGATTTTGATTTAG
ATCCAACTGAAGCCTTTGTCGTGGTCGTTAATCAAAACACTGATAATGCCACTTTGTATGCACGCGACTTAACGAGTGGT
AAACTAAGTCTATTACAAAAGGACGTTACTGTGCCTGAAGGCGTTTGCGTCCGTTTCTAG

Upstream 100 bases:

>100_bases
TAATTGTAGCATAGTCCTAATCACAGACGCCAATTTGTCATCGCTTACACGGGCCATATCTATGCTATACTTGAATTATC
TATCAAGGAGGTTTGTTATC

Downstream 100 bases:

>100_bases
TAAAGGATGAAACTCATGTTATTAAAAGAAGTCTGTGTTGAAAATTACACTAACATTCCCGCAGCCATTGCGGCCGGTGC
CAATCGGATCGAACTCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFB [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNT
VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG
SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDAQTGAFTQLGIVKTIPADYTAHN
GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSG
KLSLLQKDVTVPEGVCVRF

Sequences:

>Translated_339_residues
MQERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNT
VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG
SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDAQTGAFTQLGIVKTIPADYTAHN
GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSG
KLSLLQKDVTVPEGVCVRF
>Mature_339_residues
MQERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNT
VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG
SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDAQTGAFTQLGIVKTIPADYTAHN
GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSG
KLSLLQKDVTVPEGVCVRF

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=234, Percent_Identity=28.2051282051282, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 36539; Mature: 36539

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED
CCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCEEEEEHHHHEEECCCCC
DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA
CCCCEEEEEECCCCCEEEEEEECCCCCCEEEEHHHHHEEEEECCCCCCHHHEEEEECCCC
LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSV
EEEEEEHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCCEE
LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDAQTGAFTQLGIVKTIPADYTAHN
EEEECCCCCEEEEECCCCCEEEEECHHHHHHHHEEECCCCCCEEEECEEEECCCCCCCCC
GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV
CEEEEEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEE
VVVNQNTDNATLYARDLTSGKLSLLQKDVTVPEGVCVRF
EEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure
MQERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED
CCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCCEEEEECCCCEEEEEHHHHEEECCCCC
DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA
CCCCEEEEEECCCCCEEEEEEECCCCCCEEEEHHHHHEEEEECCCCCCHHHEEEEECCCC
LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSV
EEEEEEHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCCEE
LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDAQTGAFTQLGIVKTIPADYTAHN
EEEECCCCCEEEEECCCCCEEEEECHHHHHHHHEEECCCCCCEEEECEEEECCCCCCCCC
GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV
CEEEEEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEE
VVVNQNTDNATLYARDLTSGKLSLLQKDVTVPEGVCVRF
EEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9620952 [H]