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The map label for this gene is yfdH [C]

Identifier: 28378699

GI number: 28378699

Start: 1868305

End: 1869246

Strand: Direct

Name: yfdH [C]

Synonym: lp_2071

Alternate gene names: 28378699

Gene position: 1868305-1869246 (Clockwise)

Preceding gene: 28378698

Following gene: 28378707

Centisome position: 56.47

GC content: 42.36

Gene sequence:

>942_bases
ATGAAAACCATGAGTCTTGTTGTTCCATGCTATAACGAGGAACCAACGATTGAAATCTTTTATAACACCGTTGAAAAAGT
CCTGGCAGATAATCCAGAGTCGTTCAAGGATATCACTACTGAATATGTTTTCGTTAATGATGGCTCATCTGACGACACTT
TGAACGTACTACGAACTTTAAACGCCGCCCATCCTGACACTGTTCACTATGTCTCCTTTTCGCGAAATTTCGGTAAGGAA
GCTGGTTTATTAGCCGGCTTAGAACACACTATCGGCGATTACGTCGCCGTCATGGACGTTGATCTACAAGATCCACCAAC
TTTATTGCCTAAAATGCTGGCGATGCTTCAAACCGGTGACTATGACTGTATCGGAACAATGCGGGAAAATCGTGTCGGTG
AACCAATGATTCGGTCATTCTTATCACGCTCGTTTTACTCAGTTGTCAACAAAATTTCAAAAGTACAAATTATTCCAAAC
GCCCGTGATTACCGGTTAATGACACGTCAGATGGTTGATGCCATCTTGGAATTGCCCGAATATAACCGATTTTCAAAAGG
CATCTTCAACTGGGTCGGTTTCCGAACGACTTATTTGAAGTTTGAGAATCAGCCCCGCTCCGCTGGCGAAACACACTGGT
CAATTTGGCAGCTGTTCAATTATTCAATGGACGCTATCGTCGACTTTTCAGATGTACCCCTGAAGATTGCGACCTTCACC
GGTGGCTTGCTCTCACTAATCTCAATTATCAGTATATTTGTCGTTATTATTCGTAAAATATTATTTGATAACAGCGTCAG
TGGTTGGGCTTCAACCGTCACAATTTTGCTCTTAATCGGCGGCATCCAGCTGTTCTGTCTGGGGATTATCGGTAATTATA
TTGGTAAAATTTATATCGAATCAAAACACCGGCCCCACTACATTGTGCAGGAAAAGAAGTAA

Upstream 100 bases:

>100_bases
TGATATTCATACTGGTTTAAAATTCCTTTCTTTATTAATCAGTAGGAGCCCTGATTAATAGATCAATCTAAAAATTATAA
AAAGGTCGGATACAATTATC

Downstream 100 bases:

>100_bases
ACTTTTCAACCTAAACTGAGACGCATACGACCATATCGGGAAAATGGTATGGTCGTGTGCGTTTCGGCATCTGGATGAAG
TTAAAGGTTATGAATGAAAT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKTMSLVVPCYNEEPTIEIFYNTVEKVLADNPESFKDITTEYVFVNDGSSDDTLNVLRTLNAAHPDTVHYVSFSRNFGKE
AGLLAGLEHTIGDYVAVMDVDLQDPPTLLPKMLAMLQTGDYDCIGTMRENRVGEPMIRSFLSRSFYSVVNKISKVQIIPN
ARDYRLMTRQMVDAILELPEYNRFSKGIFNWVGFRTTYLKFENQPRSAGETHWSIWQLFNYSMDAIVDFSDVPLKIATFT
GGLLSLISIISIFVVIIRKILFDNSVSGWASTVTILLLIGGIQLFCLGIIGNYIGKIYIESKHRPHYIVQEKK

Sequences:

>Translated_313_residues
MKTMSLVVPCYNEEPTIEIFYNTVEKVLADNPESFKDITTEYVFVNDGSSDDTLNVLRTLNAAHPDTVHYVSFSRNFGKE
AGLLAGLEHTIGDYVAVMDVDLQDPPTLLPKMLAMLQTGDYDCIGTMRENRVGEPMIRSFLSRSFYSVVNKISKVQIIPN
ARDYRLMTRQMVDAILELPEYNRFSKGIFNWVGFRTTYLKFENQPRSAGETHWSIWQLFNYSMDAIVDFSDVPLKIATFT
GGLLSLISIISIFVVIIRKILFDNSVSGWASTVTILLLIGGIQLFCLGIIGNYIGKIYIESKHRPHYIVQEKK
>Mature_313_residues
MKTMSLVVPCYNEEPTIEIFYNTVEKVLADNPESFKDITTEYVFVNDGSSDDTLNVLRTLNAAHPDTVHYVSFSRNFGKE
AGLLAGLEHTIGDYVAVMDVDLQDPPTLLPKMLAMLQTGDYDCIGTMRENRVGEPMIRSFLSRSFYSVVNKISKVQIIPN
ARDYRLMTRQMVDAILELPEYNRFSKGIFNWVGFRTTYLKFENQPRSAGETHWSIWQLFNYSMDAIVDFSDVPLKIATFT
GGLLSLISIISIFVVIIRKILFDNSVSGWASTVTILLLIGGIQLFCLGIIGNYIGKIYIESKHRPHYIVQEKK

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=310, Percent_Identity=40, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1788588, Length=320, Percent_Identity=27.8125, Blast_Score=141, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24585265, Length=184, Percent_Identity=25.5434782608696, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35542; Mature: 35542

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMSLVVPCYNEEPTIEIFYNTVEKVLADNPESFKDITTEYVFVNDGSSDDTLNVLRTL
CCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHHHHHHH
NAAHPDTVHYVSFSRNFGKEAGLLAGLEHTIGDYVAVMDVDLQDPPTLLPKMLAMLQTGD
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCC
YDCIGTMRENRVGEPMIRSFLSRSFYSVVNKISKVQIIPNARDYRLMTRQMVDAILELPE
CCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCC
YNRFSKGIFNWVGFRTTYLKFENQPRSAGETHWSIWQLFNYSMDAIVDFSDVPLKIATFT
CCHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHEEECCCCCEEEEECC
GGLLSLISIISIFVVIIRKILFDNSVSGWASTVTILLLIGGIQLFCLGIIGNYIGKIYIE
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
SKHRPHYIVQEKK
CCCCCCEEEECCC
>Mature Secondary Structure
MKTMSLVVPCYNEEPTIEIFYNTVEKVLADNPESFKDITTEYVFVNDGSSDDTLNVLRTL
CCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHHHHHHH
NAAHPDTVHYVSFSRNFGKEAGLLAGLEHTIGDYVAVMDVDLQDPPTLLPKMLAMLQTGD
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCC
YDCIGTMRENRVGEPMIRSFLSRSFYSVVNKISKVQIIPNARDYRLMTRQMVDAILELPE
CCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCC
YNRFSKGIFNWVGFRTTYLKFENQPRSAGETHWSIWQLFNYSMDAIVDFSDVPLKIATFT
CCHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHEEECCCCCEEEEECC
GGLLSLISIISIFVVIIRKILFDNSVSGWASTVTILLLIGGIQLFCLGIIGNYIGKIYIE
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
SKHRPHYIVQEKK
CCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]