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The map label for this gene is 28378658

Identifier: 28378658

GI number: 28378658

Start: 1824473

End: 1825231

Strand: Direct

Name: 28378658

Synonym: lp_2023

Alternate gene names: NA

Gene position: 1824473-1825231 (Clockwise)

Preceding gene: 28378657

Following gene: 28378687

Centisome position: 55.15

GC content: 39.79

Gene sequence:

>759_bases
ATGAGTTTTATTGCGGTGGATGTCCAAACTCACGACATCATTACAATTTTACCAGGACGTAAGAATGCCGATATTAAAGA
CTTCTTTCTCAATCATTATTCTAAACGTCATCGTGACCGCGTAACTCGAGTTGTGATGGATTTTAATTCTCAATATCAAC
CCGCGATTCGAACACTCTTTCCACACGCCAAACTGGTCGCGGATAACTTTCATCTTGTTCAAATGGCCTTACGATCTTTG
AATCAAACTCGGGTCCAACTCATGAAACGCTTTAACCCTCAGAGTCGTGAATACCGAGTGCTTAAATATTATTGGCGGTT
ATATTTAAAAGATTATGACAGCCTCGAAAAGCGCAAACCCCAATGGTTTGCGCATCTTAAAGATCGCATGACACAAGAGC
AATTAGTCGTAGCCGGTTTAAATCTAGACCAACAGTTTCGACAAACCTACCAAGCCGCACATGCCTTAGTTAAGGCTTTT
CAAAAGCGTGATTATCGATCCTTCAAAGCAGCACTAGGTCATGTCGAAAATATCAGTCCTCAGCTAATGACCAATATTAA
AAGCTTTATCAAGAACCGGCAACTCATCAAAAATATGACTACCGGCCGATTATCAAATGGTCCCGTCGAAGGTGTGAACC
GTAAAATCAAGCAAATCAAAAGAACCGCGTATGGTTACAAGAACTGGCAAAACTTTATTTATCGAATTCAAATTGAGTTC
AAAATCAAAATCGAAAAAAAGAGCCCAATTCGTAAATGA

Upstream 100 bases:

>100_bases
GTCTTCATGCCATTGATCTATCATTAACTGAAGACCGTACGATGGCGAGTATTGCGGCTCAATACAATGTCTCGACGAGT
TTCGTTCAACTGGTAAACAA

Downstream 100 bases:

>100_bases
ATTGGATTCTAAATATAACTTCATCAACACCGGTTGACAGAGACCCCATTTTTGTGATGGGCATCGCCCAGCTTTTTGTA
TATTTCTGGAATTAGTTCGC

Product: transposase, fragment

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Transposase; Transposase IS; Truncated Transposase; Truncated; Transposase ISLasa4v; ISL3 Family Transposase; Transposase For IS; Transposase Fragment

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSFIAVDVQTHDIITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHLVQMALRSL
NQTRVQLMKRFNPQSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQEQLVVAGLNLDQQFRQTYQAAHALVKAF
QKRDYRSFKAALGHVENISPQLMTNIKSFIKNRQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNFIYRIQIEF
KIKIEKKSPIRK

Sequences:

>Translated_252_residues
MSFIAVDVQTHDIITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHLVQMALRSL
NQTRVQLMKRFNPQSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQEQLVVAGLNLDQQFRQTYQAAHALVKAF
QKRDYRSFKAALGHVENISPQLMTNIKSFIKNRQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNFIYRIQIEF
KIKIEKKSPIRK
>Mature_251_residues
SFIAVDVQTHDIITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHLVQMALRSLN
QTRVQLMKRFNPQSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQEQLVVAGLNLDQQFRQTYQAAHALVKAFQ
KRDYRSFKAALGHVENISPQLMTNIKSFIKNRQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNFIYRIQIEFK
IKIEKKSPIRK

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30180; Mature: 30048

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEECCCCCCC
>Mature Secondary Structure 
SFIAVDVQTHDIITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLF
CEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
PHAKLVADNFHLVQMALRSLNQTRVQLMKRFNPQSREYRVLKYYWRLYLKDYDSLEKRKP
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
QWFAHLKDRMTQEQLVVAGLNLDQQFRQTYQAAHALVKAFQKRDYRSFKAALGHVENISP
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QLMTNIKSFIKNRQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNFIYRIQIEF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCEEEEEEEEE
KIKIEKKSPIRK
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA