Click here to switch to the map view.

The map label for this gene is 28378635

Identifier: 28378635

GI number: 28378635

Start: 1804815

End: 1805567

Strand: Direct

Name: 28378635

Synonym: lp_1995

Alternate gene names: NA

Gene position: 1804815-1805567 (Clockwise)

Preceding gene: 28378634

Following gene: 28378636

Centisome position: 54.55

GC content: 36.52

Gene sequence:

>753_bases
ATGAAAAAAGTAGTCACTGGGGCTGCCATTGTTGCGTCATTATTTTTAATGGGTGGCTGTTCTAGCAGTTATAGTAAGAG
TAGCCAATCATCAAGTTCGTCAGTCAAAATATCTAAAAGTGAATTAAGTTCAAAAAAGTCTCAAAAACTGGAGGATGCTA
CTACTGACGTAGATAGTCTCTTTTCCGATTCGGGCCATACAGCATTAGTACCGGGGACAAAGAAATTATTAATTGATGAA
GTCAGCAAAGAAGTAAATAAATTAACCGACTCTAAGGGAAAGTCTAATCTTCAAAAAGAACTTAAGAATGCTTATGTTCT
TTATCCCAAGCTGGCTTCTTCAGTTGCTTCTTCCAACGCTGCTTCAAACGCAAAAGTTAGATCTGAGTCCGCATCAGAAT
CAAGTGTTGTTTTATCTGTAAGAGAGTCTTCAAGTAAGAGACACTTATCATCAAAAAGAGAATCCAGCTCATCCAATGCT
GACAAATATGCTAATAAAATTATGAATTTAGGAGTTCCAACACATGCTACTGATGTTTCTTACTCTAATCATACCGTCAC
CTGGACTGGTTTTGACGCCTGGAAAGACTATACACATCCAGAACTCAAAAAATTAATTGCATTCCTAGAAACAATTACCT
ATCAACAATCACCAAATTACAACCAAAAATCACCAAAATTAATTGTAACACTTTCTGATGGCACACAAATTGCACATGAG
GAACCTGGACGTAACCTTATTTGGGACAATTAA

Upstream 100 bases:

>100_bases
TGGCACAGCCTGACTTCAATGTCTTTGGAGCCAACACTCATAACAAGCTAGAAGTCATTAAAAGTCAACTTGAAAAGCAC
CTTATTTGGAGGAGTCTTAT

Downstream 100 bases:

>100_bases
ATATAATACTTGGCTCTCAGCACGGGCTTTTATTTAAAAGTCAAAAGAACATACGTTCATTTGTTGGGAGAACAATTATT
ATGATTATTAAGAATAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKKVVTGAAIVASLFLMGGCSSSYSKSSQSSSSSVKISKSELSSKKSQKLEDATTDVDSLFSDSGHTALVPGTKKLLIDE
VSKEVNKLTDSKGKSNLQKELKNAYVLYPKLASSVASSNAASNAKVRSESASESSVVLSVRESSSKRHLSSKRESSSSNA
DKYANKIMNLGVPTHATDVSYSNHTVTWTGFDAWKDYTHPELKKLIAFLETITYQQSPNYNQKSPKLIVTLSDGTQIAHE
EPGRNLIWDN

Sequences:

>Translated_250_residues
MKKVVTGAAIVASLFLMGGCSSSYSKSSQSSSSSVKISKSELSSKKSQKLEDATTDVDSLFSDSGHTALVPGTKKLLIDE
VSKEVNKLTDSKGKSNLQKELKNAYVLYPKLASSVASSNAASNAKVRSESASESSVVLSVRESSSKRHLSSKRESSSSNA
DKYANKIMNLGVPTHATDVSYSNHTVTWTGFDAWKDYTHPELKKLIAFLETITYQQSPNYNQKSPKLIVTLSDGTQIAHE
EPGRNLIWDN
>Mature_250_residues
MKKVVTGAAIVASLFLMGGCSSSYSKSSQSSSSSVKISKSELSSKKSQKLEDATTDVDSLFSDSGHTALVPGTKKLLIDE
VSKEVNKLTDSKGKSNLQKELKNAYVLYPKLASSVASSNAASNAKVRSESASESSVVLSVRESSSKRHLSSKRESSSSNA
DKYANKIMNLGVPTHATDVSYSNHTVTWTGFDAWKDYTHPELKKLIAFLETITYQQSPNYNQKSPKLIVTLSDGTQIAHE
EPGRNLIWDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27091; Mature: 27091

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVTGAAIVASLFLMGGCSSSYSKSSQSSSSSVKISKSELSSKKSQKLEDATTDVDSL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
FSDSGHTALVPGTKKLLIDEVSKEVNKLTDSKGKSNLQKELKNAYVLYPKLASSVASSNA
HCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEHHHHHHHHHHCCC
ASNAKVRSESASESSVVLSVRESSSKRHLSSKRESSSSNADKYANKIMNLGVPTHATDVS
CCCCHHCCCCCCCCEEEEEEHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
YSNHTVTWTGFDAWKDYTHPELKKLIAFLETITYQQSPNYNQKSPKLIVTLSDGTQIAHE
CCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEECCC
EPGRNLIWDN
CCCCCCCCCC
>Mature Secondary Structure
MKKVVTGAAIVASLFLMGGCSSSYSKSSQSSSSSVKISKSELSSKKSQKLEDATTDVDSL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
FSDSGHTALVPGTKKLLIDEVSKEVNKLTDSKGKSNLQKELKNAYVLYPKLASSVASSNA
HCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEHHHHHHHHHHCCC
ASNAKVRSESASESSVVLSVRESSSKRHLSSKRESSSSNADKYANKIMNLGVPTHATDVS
CCCCHHCCCCCCCCEEEEEEHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
YSNHTVTWTGFDAWKDYTHPELKKLIAFLETITYQQSPNYNQKSPKLIVTLSDGTQIAHE
CCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEECCC
EPGRNLIWDN
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA