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The map label for this gene is 28378470

Identifier: 28378470

GI number: 28378470

Start: 1628838

End: 1629575

Strand: Direct

Name: 28378470

Synonym: lp_1798

Alternate gene names: NA

Gene position: 1628838-1629575 (Clockwise)

Preceding gene: 28378469

Following gene: 28378471

Centisome position: 49.24

GC content: 44.58

Gene sequence:

>738_bases
ATGATTCAAAAAACAAGGGCCGAACTTAAAACCGAAATTAAGCAACTCTTTAAGGGGCGTTGGAAAGATGCCATCTTATT
ATGTATTATTATTAGCTTATTAACGATTTTCGGGGTGATGGCCAATTATTCAGATCGCGTGTCGTCGGGCAGTTCCACGA
CTGACGACACGGCTTTTAAGCAGTTGGGGACCCTGACTGGTTCTGATATATCGTTGATTTTAGCTGTAATAGCTGGGTTT
TTACTGGTTCAAGTTGGTGTCTGGCTGGTCGTTCAAATCTTTCGGATTGGGACGAGTTATGCGATGTTGGACTGGGTCCG
ACAACCAGAACGCCAGATCCATCCGGTCAGTGACTCAACGGTCGGGTTCACTAAACGTTATGGGTGGGCACTGGTCGGTC
TGATTATTTATAAAACTGTGCTTATCTTCCTATGGAGCCTGCTATTGGTGGTTCCGGGTATTATTAAGGCGTACGCTTAT
TCACAGACTTTTTATGCGTATAAGGACTTGTTAGCTGCAACACCTGCTGGTCAAGCACGGCCACGCTATCGTGATGCGGT
CACCCGTAGCCGTCAGTTGATGCACGGGCACAAGTGGCAGTTATTCGTGTTGCATTTAAGCTTTTTGGGTTGGGAACTTC
TCAGTATCTTAACGGCTGGAATCGGCCAGTTATGGTTGGTACCATATATTTATGGTGTACTTGCCAACTATTATGATAAT
TTACAAGCAATTAATTAA

Upstream 100 bases:

>100_bases
TTGGCATTTTGCCAGCGCTTTTTTAGGGTTTTGCCGTTGACTAACGGGGACAAAAAACGGAAAATGGACTAAATTAAACA
AGTAGTGGAGGAGTGGCGCA

Downstream 100 bases:

>100_bases
TGAACGTCGATATTAAAAATCGACACAAATAATATTGTTTCTTTTATTAAGCATTAAGACAAGCCCGCCAAAATATGGTA
AACTGGCGGAAGCAAGAAAG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIQKTRAELKTEIKQLFKGRWKDAILLCIIISLLTIFGVMANYSDRVSSGSSTTDDTAFKQLGTLTGSDISLILAVIAGF
LLVQVGVWLVVQIFRIGTSYAMLDWVRQPERQIHPVSDSTVGFTKRYGWALVGLIIYKTVLIFLWSLLLVVPGIIKAYAY
SQTFYAYKDLLAATPAGQARPRYRDAVTRSRQLMHGHKWQLFVLHLSFLGWELLSILTAGIGQLWLVPYIYGVLANYYDN
LQAIN

Sequences:

>Translated_245_residues
MIQKTRAELKTEIKQLFKGRWKDAILLCIIISLLTIFGVMANYSDRVSSGSSTTDDTAFKQLGTLTGSDISLILAVIAGF
LLVQVGVWLVVQIFRIGTSYAMLDWVRQPERQIHPVSDSTVGFTKRYGWALVGLIIYKTVLIFLWSLLLVVPGIIKAYAY
SQTFYAYKDLLAATPAGQARPRYRDAVTRSRQLMHGHKWQLFVLHLSFLGWELLSILTAGIGQLWLVPYIYGVLANYYDN
LQAIN
>Mature_245_residues
MIQKTRAELKTEIKQLFKGRWKDAILLCIIISLLTIFGVMANYSDRVSSGSSTTDDTAFKQLGTLTGSDISLILAVIAGF
LLVQVGVWLVVQIFRIGTSYAMLDWVRQPERQIHPVSDSTVGFTKRYGWALVGLIIYKTVLIFLWSLLLVVPGIIKAYAY
SQTFYAYKDLLAATPAGQARPRYRDAVTRSRQLMHGHKWQLFVLHLSFLGWELLSILTAGIGQLWLVPYIYGVLANYYDN
LQAIN

Specific function: Unknown

COG id: COG5523

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27656; Mature: 27656

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCC
>Mature Secondary Structure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HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA