Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is 28378442

Identifier: 28378442

GI number: 28378442

Start: 1601212

End: 1601466

Strand: Direct

Name: 28378442

Synonym: lp_1765

Alternate gene names: NA

Gene position: 1601212-1601466 (Clockwise)

Preceding gene: 28378441

Following gene: 28378443

Centisome position: 48.4

GC content: 44.71

Gene sequence:

>255_bases
TTGTGGAAGCTTAAGTGGTTATTGTTAAATTGGTATCGGCAGACGATCAAAAAGGTATTCGTTGTTCATTGCAACGATCA
AAGAATAGTGCAATACGAGAGGAGTTGTCATATGCAATTACAAATTCGACGTTTTAAAACTACGGATGCGCCAGCAGCGG
CGGCACTGATTGCGCGCGCATTACTGACGAGTAATCAGGGTGACTATCCCAAAGCATACTTGGATCGGCTCATTACCCAG
ATGACACCGGCTTGA

Upstream 100 bases:

>100_bases
ATTAATTTTGGTCACGCTTTTCCGCGAACGGCACTTCCATATGGGGCGCAAGTGTGTATCGATTTTGAGCAAGCTACGTT
AAAAATTTTAGAACCTTGGT

Downstream 100 bases:

>100_bases
CTATGCCAAAAAGCTGCTGCGACGCACTTTTATGTCGGTTATTTTCAGCAGCAACTCGTTGCGACCGGGGCGATTGGGTC
ATACTGGGGGCGCCCAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MWKLKWLLLNWYRQTIKKVFVVHCNDQRIVQYERSCHMQLQIRRFKTTDAPAAAALIARALLTSNQGDYPKAYLDRLITQ
MTPA

Sequences:

>Translated_84_residues
MWKLKWLLLNWYRQTIKKVFVVHCNDQRIVQYERSCHMQLQIRRFKTTDAPAAAALIARALLTSNQGDYPKAYLDRLITQ
MTPA
>Mature_84_residues
MWKLKWLLLNWYRQTIKKVFVVHCNDQRIVQYERSCHMQLQIRRFKTTDAPAAAALIARALLTSNQGDYPKAYLDRLITQ
MTPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9952; Mature: 9952

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKLKWLLLNWYRQTIKKVFVVHCNDQRIVQYERSCHMQLQIRRFKTTDAPAAAALIARA
CCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHH
LLTSNQGDYPKAYLDRLITQMTPA
HHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MWKLKWLLLNWYRQTIKKVFVVHCNDQRIVQYERSCHMQLQIRRFKTTDAPAAAALIARA
CCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHH
LLTSNQGDYPKAYLDRLITQMTPA
HHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA