| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is pgm [H]
Identifier: 28377622
GI number: 28377622
Start: 697830
End: 699557
Strand: Direct
Name: pgm [H]
Synonym: lp_0764
Alternate gene names: 28377622
Gene position: 697830-699557 (Clockwise)
Preceding gene: 28377619
Following gene: 28377624
Centisome position: 21.09
GC content: 44.33
Gene sequence:
>1728_bases GTGAGTTGGCAGGATACTTATAATACCTGGAAAAACCAAGCGACACTTGAAACTAGTTTAAAACAAGAATTGACGGGCAT GGCTGGCGATGACGCCGCCTTAGAAGACGCCTTTTATGAACCAATGGAATTCGGAACCGCGGGGATGCGGGGGGTACTTG GACCTGGTATCAACCGGATGAATATTTATACGGTTCGTCAAGCAACGGAAGGGTTAGCACGCTTCATGGATACCTTGCCT GCTGAGGTTAAGGAACGCGGGGTAGCAATCAGTTTTGATTCCCGCCATCATTCAGAAGATTTTGCGCATGAATCTGCGCG AGTATTGGGCCAACATGGTATCAAGTCATACGTTTTTGAAAGCTTGCGGCCAACCCCAGAACTTTCATTTACCGTTCGGC ATCTGCATACTTACGCAGGGATCATGATTACGGCGAGCCATAATCCGAAGCAATATAATGGCTACAAGATTTATGGCGAA GATGGTGGTCAAATGCCACCTAAGGAATCTGATCTTATCACATCATATATTCGTAAAGTTGACGATGTCTTTGCGATTGC CGTTGCTGATGAACAACAATTATTAGCTGATAAGACGGAAACCATTATTGGGGATGATGTCGATCAGGACTACTTAGCTA AGGTCAAAGAAGTGACGATCAATCAAAAACTAGTGGATGAAGTCGGTAAGGACATGAAGTTAGTCTTCACACCATTACAT GGGACTGGCCGGATGCTTGGCGAAAAGGCTTTGAAGAATGCCGGGTTTAAAAACTTCAGTGTTGTTAAGGAACAAGCTGT GGCTGACCCTGAATTCTCGACGGTTAAATTCCCTAATCCTGAATTTCCTGAAGCCTTTAAGATGGCCATTGATTTGGGTA AAAAAGAAGGTGCGGATGTCTTGATTGCGGTTGATCCTGATGCTGACCGGTTAGGGACAGCTGTTCGTCAACCTAATGGT GAGTATGTTCTGTTGACGGGTAATCAAATTGCCGCTGTCTTGTTACACTACATCTTGCAAGCAAACAAGGATGCCGGGAC GTTACCGACCAATGCGGCCGCAGTTAAGTCAATTGTTTCAAGTGAATTTGCTACTAAAGTAGCGGCTTCATATGGTGTCA CGATGATCAATGTCTTGACCGGTTTCAAGTATATTGCTGAACAAATCGAACATTTTGAAGCCACTGGCGAACATACCTAT ATGTTTGGTTTTGAAGAAAGTTACGGTTACTTAATCAAACCATTTGTTCATGACAAGGATGCGATTCAAACCACAGTGCT TTTAGCCGAAGTAGCGGCTTATTATAAGCAACAAGGTAAGAACCTTTATGATGGATTACAAGACTTGTTTAAGGAATACG GTTACTTCCGCGAGCAAACCACGTCCGAAGAATTTGATGGCGTTGGCGGCAGCGATAAGATTGCGGCTCTGATGACTAAG TTCCGAAGCGAAGCACCAACTGCCTTTGCCGGCTACGATGTCACTGGGACTGAAGACTTCCAGAGTCAAACGGAAAGCTT TGCTGATGGCCACACGGCACCAATTGCTTTGCCAAAGGCGAATGTCTTGAAGTATCATTTAAATGATGGCACTTGGATCG CCATTCGGCCATCTGGTACGGAACCAAAGATCAAGTTCTACATTGGAACGCTAGGTAGTACGTTAGAAGAAGCTAATGAT AAGTTAGCGAAATTTGAAGATGCCATTCAAGCGTTTATTAAAGAATAA
Upstream 100 bases:
>100_bases ATTAATGGATTTTCTTAGTAAATTTTACTTTGTAAAGTGTGTCAATGTTGTATACTATTTTTGTAAGCACTAACAAATAT CGGAATTGGAGATGGTTTTT
Downstream 100 bases:
>100_bases ATTGGTTATTTAGTCAGAAGTTGTACGGCCCAGCTGACTAGCCATGCTAAGTGATAAATAACGCCTTACGAAATTTCAAG TTAATTTCGTAAGGCGTTAT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MSWQDTYNTWKNQATLETSLKQELTGMAGDDAALEDAFYEPMEFGTAGMRGVLGPGINRMNIYTVRQATEGLARFMDTLP AEVKERGVAISFDSRHHSEDFAHESARVLGQHGIKSYVFESLRPTPELSFTVRHLHTYAGIMITASHNPKQYNGYKIYGE DGGQMPPKESDLITSYIRKVDDVFAIAVADEQQLLADKTETIIGDDVDQDYLAKVKEVTINQKLVDEVGKDMKLVFTPLH GTGRMLGEKALKNAGFKNFSVVKEQAVADPEFSTVKFPNPEFPEAFKMAIDLGKKEGADVLIAVDPDADRLGTAVRQPNG EYVLLTGNQIAAVLLHYILQANKDAGTLPTNAAAVKSIVSSEFATKVAASYGVTMINVLTGFKYIAEQIEHFEATGEHTY MFGFEESYGYLIKPFVHDKDAIQTTVLLAEVAAYYKQQGKNLYDGLQDLFKEYGYFREQTTSEEFDGVGGSDKIAALMTK FRSEAPTAFAGYDVTGTEDFQSQTESFADGHTAPIALPKANVLKYHLNDGTWIAIRPSGTEPKIKFYIGTLGSTLEEAND KLAKFEDAIQAFIKE
Sequences:
>Translated_575_residues MSWQDTYNTWKNQATLETSLKQELTGMAGDDAALEDAFYEPMEFGTAGMRGVLGPGINRMNIYTVRQATEGLARFMDTLP AEVKERGVAISFDSRHHSEDFAHESARVLGQHGIKSYVFESLRPTPELSFTVRHLHTYAGIMITASHNPKQYNGYKIYGE DGGQMPPKESDLITSYIRKVDDVFAIAVADEQQLLADKTETIIGDDVDQDYLAKVKEVTINQKLVDEVGKDMKLVFTPLH GTGRMLGEKALKNAGFKNFSVVKEQAVADPEFSTVKFPNPEFPEAFKMAIDLGKKEGADVLIAVDPDADRLGTAVRQPNG EYVLLTGNQIAAVLLHYILQANKDAGTLPTNAAAVKSIVSSEFATKVAASYGVTMINVLTGFKYIAEQIEHFEATGEHTY MFGFEESYGYLIKPFVHDKDAIQTTVLLAEVAAYYKQQGKNLYDGLQDLFKEYGYFREQTTSEEFDGVGGSDKIAALMTK FRSEAPTAFAGYDVTGTEDFQSQTESFADGHTAPIALPKANVLKYHLNDGTWIAIRPSGTEPKIKFYIGTLGSTLEEAND KLAKFEDAIQAFIKE >Mature_574_residues SWQDTYNTWKNQATLETSLKQELTGMAGDDAALEDAFYEPMEFGTAGMRGVLGPGINRMNIYTVRQATEGLARFMDTLPA EVKERGVAISFDSRHHSEDFAHESARVLGQHGIKSYVFESLRPTPELSFTVRHLHTYAGIMITASHNPKQYNGYKIYGED GGQMPPKESDLITSYIRKVDDVFAIAVADEQQLLADKTETIIGDDVDQDYLAKVKEVTINQKLVDEVGKDMKLVFTPLHG TGRMLGEKALKNAGFKNFSVVKEQAVADPEFSTVKFPNPEFPEAFKMAIDLGKKEGADVLIAVDPDADRLGTAVRQPNGE YVLLTGNQIAAVLLHYILQANKDAGTLPTNAAAVKSIVSSEFATKVAASYGVTMINVLTGFKYIAEQIEHFEATGEHTYM FGFEESYGYLIKPFVHDKDAIQTTVLLAEVAAYYKQQGKNLYDGLQDLFKEYGYFREQTTSEEFDGVGGSDKIAALMTKF RSEAPTAFAGYDVTGTEDFQSQTESFADGHTAPIALPKANVLKYHLNDGTWIAIRPSGTEPKIKFYIGTLGSTLEEANDK LAKFEDAIQAFIKE
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=558, Percent_Identity=32.7956989247312, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI31377548, Length=545, Percent_Identity=30.4587155963303, Blast_Score=245, Evalue=8e-65, Organism=Escherichia coli, GI1786904, Length=539, Percent_Identity=25.7884972170686, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71993870, Length=531, Percent_Identity=30.6967984934087, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71993878, Length=281, Percent_Identity=33.8078291814947, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323934, Length=611, Percent_Identity=30.6055646481178, Blast_Score=206, Evalue=6e-54, Organism=Drosophila melanogaster, GI20129809, Length=567, Percent_Identity=27.689594356261, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24651977, Length=436, Percent_Identity=30.045871559633, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24653722, Length=580, Percent_Identity=28.1034482758621, Blast_Score=210, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 63537; Mature: 63406
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWQDTYNTWKNQATLETSLKQELTGMAGDDAALEDAFYEPMEFGTAGMRGVLGPGINRM CCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCE NIYTVRQATEGLARFMDTLPAEVKERGVAISFDSRHHSEDFAHESARVLGQHGIKSYVFE EEEEHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH SLRPTPELSFTVRHLHTYAGIMITASHNPKQYNGYKIYGEDGGQMPPKESDLITSYIRKV HCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH DDVFAIAVADEQQLLADKTETIIGDDVDQDYLAKVKEVTINQKLVDEVGKDMKLVFTPLH HHHEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC GTGRMLGEKALKNAGFKNFSVVKEQAVADPEFSTVKFPNPEFPEAFKMAIDLGKKEGADV CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEE LIAVDPDADRLGTAVRQPNGEYVLLTGNQIAAVLLHYILQANKDAGTLPTNAAAVKSIVS EEEECCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH SEFATKVAASYGVTMINVLTGFKYIAEQIEHFEATGEHTYMFGFEESYGYLIKPFVHDKD HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCHH AIQTTVLLAEVAAYYKQQGKNLYDGLQDLFKEYGYFREQTTSEEFDGVGGSDKIAALMTK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCHHHCCCCCCHHHHHHHHH FRSEAPTAFAGYDVTGTEDFQSQTESFADGHTAPIALPKANVLKYHLNDGTWIAIRPSGT HHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCEEEEEECCCC EPKIKFYIGTLGSTLEEANDKLAKFEDAIQAFIKE CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWQDTYNTWKNQATLETSLKQELTGMAGDDAALEDAFYEPMEFGTAGMRGVLGPGINRM CCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCE NIYTVRQATEGLARFMDTLPAEVKERGVAISFDSRHHSEDFAHESARVLGQHGIKSYVFE EEEEHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH SLRPTPELSFTVRHLHTYAGIMITASHNPKQYNGYKIYGEDGGQMPPKESDLITSYIRKV HCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH DDVFAIAVADEQQLLADKTETIIGDDVDQDYLAKVKEVTINQKLVDEVGKDMKLVFTPLH HHHEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC GTGRMLGEKALKNAGFKNFSVVKEQAVADPEFSTVKFPNPEFPEAFKMAIDLGKKEGADV CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEE LIAVDPDADRLGTAVRQPNGEYVLLTGNQIAAVLLHYILQANKDAGTLPTNAAAVKSIVS EEEECCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH SEFATKVAASYGVTMINVLTGFKYIAEQIEHFEATGEHTYMFGFEESYGYLIKPFVHDKD HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCHH AIQTTVLLAEVAAYYKQQGKNLYDGLQDLFKEYGYFREQTTSEEFDGVGGSDKIAALMTK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCHHHCCCCCCHHHHHHHHH FRSEAPTAFAGYDVTGTEDFQSQTESFADGHTAPIALPKANVLKYHLNDGTWIAIRPSGT HHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCEEEEEECCCC EPKIKFYIGTLGSTLEEANDKLAKFEDAIQAFIKE CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]