| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is phoU [H]
Identifier: 28377610
GI number: 28377610
Start: 687277
End: 687951
Strand: Direct
Name: phoU [H]
Synonym: lp_0751
Alternate gene names: 28377610
Gene position: 687277-687951 (Clockwise)
Preceding gene: 28377609
Following gene: 28377611
Centisome position: 20.77
GC content: 44.15
Gene sequence:
>675_bases ATGCGACGACTTTTTGATGATGAACTAAACGATATTGATGCAAACTTCACTGAAATGGGAATGATGGTTAGCGAGACGAT TGAAAAGGCAGTCAAGGCGTTTATCGACCATGACCGCGACCTCGCACAAGAAATCATTGATAATGATGCTAAAATCAACC AACGGGAAGTTGAACTAGAACAGAAATCATTTGAGATGATTGCGTTATACCAACCCGTCACTTCTGATTTGCGAGAAATT GTCACCATTTTGAAAGCCGTCTCTGAATTGGAACGGATGGCCGATTATGCACGTAATATTGCTCACGCTACGATTCGGGT CAAAGGAAATGTGCGCGTCCCTGAAATTGAGGCAGCGTTATCAGAAATGGGGAATCGCGTGCGAAAGATGGTCGAAGAGA TGTTGGCAGCTTACGTCAAAAGTGATGATCAGGAAGCACGCCGGGTCGCAGCTAAAGACGCAAAAGTCGGGGAGATGTAT GATCGTATTAATGAGAAGGGGATCTCCAAGATGGAGCGCCATCCTGAGACGGTCATCGGTTCCACGGATTACCTGAATGT TGCAACTTACTTAATGCGCATCGGGGCGTTAGTAACTAATATTGGTGAGTGGATCGTGTATTTGAATACTGGTGAGATTA TCGAATTGAATCCAGAAAGTTCTAATTTAGTGTAA
Upstream 100 bases:
>100_bases ATTAATTGAGGTCAACGACACGAAACAGATTTTCATGAATCCAGTTAAACAGGAAACCAATGACTATATTTCAGGACGAT TTGGTTAGGAGGAAAAAAAC
Downstream 100 bases:
>100_bases CTAATCATAAATAATTGCTTAAAGCCGGTCGTCTAGTTTGCAACCGGCTTTTACAATTAGTAAGATGTGGTTAGATAAAC TGATAAGGAGCGTCTAACGA
Product: phosphate transport system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRRLFDDELNDIDANFTEMGMMVSETIEKAVKAFIDHDRDLAQEIIDNDAKINQREVELEQKSFEMIALYQPVTSDLREI VTILKAVSELERMADYARNIAHATIRVKGNVRVPEIEAALSEMGNRVRKMVEEMLAAYVKSDDQEARRVAAKDAKVGEMY DRINEKGISKMERHPETVIGSTDYLNVATYLMRIGALVTNIGEWIVYLNTGEIIELNPESSNLV
Sequences:
>Translated_224_residues MRRLFDDELNDIDANFTEMGMMVSETIEKAVKAFIDHDRDLAQEIIDNDAKINQREVELEQKSFEMIALYQPVTSDLREI VTILKAVSELERMADYARNIAHATIRVKGNVRVPEIEAALSEMGNRVRKMVEEMLAAYVKSDDQEARRVAAKDAKVGEMY DRINEKGISKMERHPETVIGSTDYLNVATYLMRIGALVTNIGEWIVYLNTGEIIELNPESSNLV >Mature_224_residues MRRLFDDELNDIDANFTEMGMMVSETIEKAVKAFIDHDRDLAQEIIDNDAKINQREVELEQKSFEMIALYQPVTSDLREI VTILKAVSELERMADYARNIAHATIRVKGNVRVPEIEAALSEMGNRVRKMVEEMLAAYVKSDDQEARRVAAKDAKVGEMY DRINEKGISKMERHPETVIGSTDYLNVATYLMRIGALVTNIGEWIVYLNTGEIIELNPESSNLV
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=208, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25514; Mature: 25514
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLFDDELNDIDANFTEMGMMVSETIEKAVKAFIDHDRDLAQEIIDNDAKINQREVELE CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH QKSFEMIALYQPVTSDLREIVTILKAVSELERMADYARNIAHATIRVKGNVRVPEIEAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH SEMGNRVRKMVEEMLAAYVKSDDQEARRVAAKDAKVGEMYDRINEKGISKMERHPETVIG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCC STDYLNVATYLMRIGALVTNIGEWIVYLNTGEIIELNPESSNLV CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCC >Mature Secondary Structure MRRLFDDELNDIDANFTEMGMMVSETIEKAVKAFIDHDRDLAQEIIDNDAKINQREVELE CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH QKSFEMIALYQPVTSDLREIVTILKAVSELERMADYARNIAHATIRVKGNVRVPEIEAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH SEMGNRVRKMVEEMLAAYVKSDDQEARRVAAKDAKVGEMYDRINEKGISKMERHPETVIG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCC STDYLNVATYLMRIGALVTNIGEWIVYLNTGEIIELNPESSNLV CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]