| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377554
Identifier: 28377554
GI number: 28377554
Start: 627739
End: 628035
Strand: Direct
Name: 28377554
Synonym: lp_0682
Alternate gene names: NA
Gene position: 627739-628035 (Clockwise)
Preceding gene: 28377553
Following gene: 28377555
Centisome position: 18.97
GC content: 39.73
Gene sequence:
>297_bases TTGCATACACTATTAGGATTAGGTTGGGATGAATGGGGATCGATCGTTGCCATTGTCACTAGTATTTGTGTATTAGCTAA TTGGATTCTCAATAAGACGGTCCGTATCCCGCTTAACGATTTAGGCAAGCGGCTTAGCCGTTTTACCGATGAAAGTTTAA AAGTGAGACAGCAAAATGCCGACACAATGAACGCGATTGAAAATCGGGTCATTAAGGTAGAAGGCCGGTTAGATGGTCAT GACATTGAATTTAAACATCTATATGAAAAGGAAGCCAAAGGAAATGAAAAAGATTAG
Upstream 100 bases:
>100_bases CGCTCAGCGAAACGGCCTAAGTATGACTACATTAGCTAATCAGAATGGCAAGACGATTTACACTACTATCTATCCTGGCC AGCGATTGGTGGTGCGGTAA
Downstream 100 bases:
>100_bases TTTAAAGAATGCTGACGGCTCATTTAATGGTAAGCTGATAGCTGGTATTATTTCACTGTTAATCGTGCTAATTCAGCAAA TTCTAGCTGTATTTGGGATT
Product: prophage Lp1 protein 59
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MHTLLGLGWDEWGSIVAIVTSICVLANWILNKTVRIPLNDLGKRLSRFTDESLKVRQQNADTMNAIENRVIKVEGRLDGH DIEFKHLYEKEAKGNEKD
Sequences:
>Translated_98_residues MHTLLGLGWDEWGSIVAIVTSICVLANWILNKTVRIPLNDLGKRLSRFTDESLKVRQQNADTMNAIENRVIKVEGRLDGH DIEFKHLYEKEAKGNEKD >Mature_98_residues MHTLLGLGWDEWGSIVAIVTSICVLANWILNKTVRIPLNDLGKRLSRFTDESLKVRQQNADTMNAIENRVIKVEGRLDGH DIEFKHLYEKEAKGNEKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11217; Mature: 11217
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTLLGLGWDEWGSIVAIVTSICVLANWILNKTVRIPLNDLGKRLSRFTDESLKVRQQNA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHCCHHHHHHHCCC DTMNAIENRVIKVEGRLDGHDIEFKHLYEKEAKGNEKD HHHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MHTLLGLGWDEWGSIVAIVTSICVLANWILNKTVRIPLNDLGKRLSRFTDESLKVRQQNA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHCCHHHHHHHCCC DTMNAIENRVIKVEGRLDGHDIEFKHLYEKEAKGNEKD HHHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA