Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377525

Identifier: 28377525

GI number: 28377525

Start: 604488

End: 604670

Strand: Direct

Name: 28377525

Synonym: lp_0652

Alternate gene names: NA

Gene position: 604488-604670 (Clockwise)

Preceding gene: 28377524

Following gene: 28377526

Centisome position: 18.27

GC content: 34.43

Gene sequence:

>183_bases
ATGAGCGATGAGTTGAGATGGCATATTACAATTGTTCGAGAAATTGAAGGACTAGAAGTTCAAACGGAATTTGATACTCC
ATTTGAATTAAAGCATTTATTAAAAACTATGTCTGATTATATTGGTGATGACAAGCCCAAGATGGTCAGCATTAAAGTAA
TTGGAGATGGCGACGATGATTAA

Upstream 100 bases:

>100_bases
GCCGATTGGGTGGCATGGACGATAATTTGCTTTATGGTTGTCGGTGGTATCAAGTTGCTGGTGATTGTCTTAGGCTGGCT
ATTCTAGGGAGATGGTGACG

Downstream 100 bases:

>100_bases
GTTTAGAGTGTGGGACAACGAGTGCAAGGTAATTAGAGACTATGACGAATTGAAAGGGTTGACCTTGGACGCCTTAGACG
CAAGTGATTTTAAGCTTGAG

Product: prophage Lp1 protein 29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MSDELRWHITIVREIEGLEVQTEFDTPFELKHLLKTMSDYIGDDKPKMVSIKVIGDGDDD

Sequences:

>Translated_60_residues
MSDELRWHITIVREIEGLEVQTEFDTPFELKHLLKTMSDYIGDDKPKMVSIKVIGDGDDD
>Mature_59_residues
SDELRWHITIVREIEGLEVQTEFDTPFELKHLLKTMSDYIGDDKPKMVSIKVIGDGDDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6951; Mature: 6820

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDELRWHITIVREIEGLEVQTEFDTPFELKHLLKTMSDYIGDDKPKMVSIKVIGDGDDD
CCCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
SDELRWHITIVREIEGLEVQTEFDTPFELKHLLKTMSDYIGDDKPKMVSIKVIGDGDDD
CCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA