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The map label for this gene is yqaN [H]

Identifier: 28377520

GI number: 28377520

Start: 603219

End: 603638

Strand: Direct

Name: yqaN [H]

Synonym: lp_0647

Alternate gene names: 28377520

Gene position: 603219-603638 (Clockwise)

Preceding gene: 28377519

Following gene: 28377521

Centisome position: 18.23

GC content: 45.71

Gene sequence:

>420_bases
ATGATTAAGCATACTTTCATGCTGACGCCAGTTCAGCAGCAACGACCGCGAGCAACGCACTATGGTCGATCGATTCGGCT
GTATGATCCTAAAGCAGTCAAGCAATTCAAGCAGGCTATCGCTGAGGAAGCCATGCTCACGTATCGACATCAGCCGTTGT
CAGGCAGTTTGGCAGTTGCCTTGGTATTTTATCGACCGGTACAACAAAGCTTGTCTAAGGTCGAAAAACAGCGCCGGATT
GACGGCAAACACTTACCAGTCGTTAAGCCAGATTTAGACAATTATATCAAGTCGTTTCTTGACGCATTACACAGTATTTA
CTGGCAAGATGATGCACTGATAACAGATATTGTCGCTAGTAAACGTTATGGCCGGCAACCGAGGATTGAGATTGAGGTTA
AGGAGATTGAACAAGGATGA

Upstream 100 bases:

>100_bases
AAGATTGACGCCCCAGAGTTTTCGATTAGACAGGCCAGTATGTCTAACGGGGTCGTTAATGGCTATTACATTAGTTGGGT
ACCGGGGCTGAAAAATAAAC

Downstream 100 bases:

>100_bases
CAAGTTTATCAATGGTATTGGGTAAAGAAGCGGTAGTGGCCTACATGGTCGTCCTGACCTTCCAGGGCGAAATCACGAAA
AACTACCCAAAGATTTATAA

Product: prophage Lp1 protein 24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIKHTFMLTPVQQQRPRATHYGRSIRLYDPKAVKQFKQAIAEEAMLTYRHQPLSGSLAVALVFYRPVQQSLSKVEKQRRI
DGKHLPVVKPDLDNYIKSFLDALHSIYWQDDALITDIVASKRYGRQPRIEIEVKEIEQG

Sequences:

>Translated_139_residues
MIKHTFMLTPVQQQRPRATHYGRSIRLYDPKAVKQFKQAIAEEAMLTYRHQPLSGSLAVALVFYRPVQQSLSKVEKQRRI
DGKHLPVVKPDLDNYIKSFLDALHSIYWQDDALITDIVASKRYGRQPRIEIEVKEIEQG
>Mature_139_residues
MIKHTFMLTPVQQQRPRATHYGRSIRLYDPKAVKQFKQAIAEEAMLTYRHQPLSGSLAVALVFYRPVQQSLSKVEKQRRI
DGKHLPVVKPDLDNYIKSFLDALHSIYWQDDALITDIVASKRYGRQPRIEIEVKEIEQG

Specific function: Unknown

COG id: COG4570

COG function: function code L; Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008822 [H]

Pfam domain/function: PF05866 RusA [H]

EC number: NA

Molecular weight: Translated: 16188; Mature: 16188

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKHTFMLTPVQQQRPRATHYGRSIRLYDPKAVKQFKQAIAEEAMLTYRHQPLSGSLAVA
CCCCEEEECCCHHHCCCHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LVFYRPVQQSLSKVEKQRRIDGKHLPVVKPDLDNYIKSFLDALHSIYWQDDALITDIVAS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KRYGRQPRIEIEVKEIEQG
HHCCCCCCEEEEHCCCCCC
>Mature Secondary Structure
MIKHTFMLTPVQQQRPRATHYGRSIRLYDPKAVKQFKQAIAEEAMLTYRHQPLSGSLAVA
CCCCEEEECCCHHHCCCHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LVFYRPVQQSLSKVEKQRRIDGKHLPVVKPDLDNYIKSFLDALHSIYWQDDALITDIVAS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KRYGRQPRIEIEVKEIEQG
HHCCCCCCEEEEHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]