Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377510

Identifier: 28377510

GI number: 28377510

Start: 597358

End: 597540

Strand: Direct

Name: 28377510

Synonym: lp_0636

Alternate gene names: NA

Gene position: 597358-597540 (Clockwise)

Preceding gene: 28377509

Following gene: 28377511

Centisome position: 18.06

GC content: 43.72

Gene sequence:

>183_bases
ATGCAAGCAATTAAAAATCACAAACGTGAACTTGTCGATTCAATCATCGAACTGCTCCCGGCAGTGTCACCGAGTCTAAT
CAATGCTAAGACATTCTGGATGTCGGAAGGCGAGCTTCAAGAACTGATAGGCATGATTCACGACGGGGACCGGAACGAAT
TTTACGAGATGATTAACTCTTAA

Upstream 100 bases:

>100_bases
TAATGTTTATCAAACTAACGAAAGCAAAATTGATGGAGTACGTCGAGTATTCGAGTCGTTAAAAGCCAATATTTAATTTT
CAAAGAACGGAGGAGACAAC

Downstream 100 bases:

>100_bases
TTATATTATCCGGCGTTTTTAATTCAGGTTAAACCCATAAAACTGAAAGGTGGTGATGGAATGTCAACACAGTCTAGCTC
AGTATTTGCAGGTAGCACGT

Product: prophage Lp1 protein 13

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MQAIKNHKRELVDSIIELLPAVSPSLINAKTFWMSEGELQELIGMIHDGDRNEFYEMINS

Sequences:

>Translated_60_residues
MQAIKNHKRELVDSIIELLPAVSPSLINAKTFWMSEGELQELIGMIHDGDRNEFYEMINS
>Mature_60_residues
MQAIKNHKRELVDSIIELLPAVSPSLINAKTFWMSEGELQELIGMIHDGDRNEFYEMINS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6904; Mature: 6904

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIKNHKRELVDSIIELLPAVSPSLINAKTFWMSEGELQELIGMIHDGDRNEFYEMINS
CCHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MQAIKNHKRELVDSIIELLPAVSPSLINAKTFWMSEGELQELIGMIHDGDRNEFYEMINS
CCHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA