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The map label for this gene is yacP [H]

Identifier: 28377489

GI number: 28377489

Start: 583896

End: 584441

Strand: Direct

Name: yacP [H]

Synonym: lp_0613

Alternate gene names: 28377489

Gene position: 583896-584441 (Clockwise)

Preceding gene: 28377488

Following gene: 28377490

Centisome position: 17.65

GC content: 44.14

Gene sequence:

>546_bases
ATGAAACAACAATTATTGATTGTCGATGCTTACAATATGATTGGCAACTGGCCAGAACTCAATCATTTAAAACAAACGGA
CCGGTTGCCGCAAGCTCGTGACGAGTTAATTAGCATGTTGACTGAGTATAAAAAAATTACGGGCCTTAATATTAGCCTGG
TTTTTGATGCGATGTACGTTCCGGGTAATTCTAAGAGTTATCGCCAAGCTGATCTTGAGATTATTTGGACGAGTAAAGAC
CAGACCGCTGACAGTTATATCGAAAAGTACGCGGGTGAAAAGCAATCGAGAGTACTTCAAGTGACGGTTGCGACTAGTGA
CCAGGCAGAACAATGGGTAATCTTTTCGGAAGGTGCATTACGAGTACCAGCCTTGGAATTACGACACCGCGTCAAGACTG
CGCTGAAAGATGTGCGTCATACTGCCGTGCGCACCCAGGATTTAGGTGCCGTTCGTAAATCACCCTGGAATGATGATCAA
TTATCGGCCTTGGATCAGTACCGCCAACAACTAGAACGCAATCACGTTAAACATCATCACAAGTAA

Upstream 100 bases:

>100_bases
ATTCCAATGATTGGTCATGTTCAAAGTTTGAATGCCAGTGTGGCGGCCAGCCTTCTGATTTATCAAGGCTACACGTCCCG
GCATCCACTGGGAAAATAAG

Downstream 100 bases:

>100_bases
TTAGGTGGTTGCCGCGAGCGTGGGTTGTTTCTAAATCGTCATAATTAATATTTAAATTTTGCAAAAGATAACCAGTGGCA
ATTTAAGGCTCGAAAGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKQQLLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMYVPGNSKSYRQADLEIIWTSKD
QTADSYIEKYAGEKQSRVLQVTVATSDQAEQWVIFSEGALRVPALELRHRVKTALKDVRHTAVRTQDLGAVRKSPWNDDQ
LSALDQYRQQLERNHVKHHHK

Sequences:

>Translated_181_residues
MKQQLLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMYVPGNSKSYRQADLEIIWTSKD
QTADSYIEKYAGEKQSRVLQVTVATSDQAEQWVIFSEGALRVPALELRHRVKTALKDVRHTAVRTQDLGAVRKSPWNDDQ
LSALDQYRQQLERNHVKHHHK
>Mature_181_residues
MKQQLLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMYVPGNSKSYRQADLEIIWTSKD
QTADSYIEKYAGEKQSRVLQVTVATSDQAEQWVIFSEGALRVPALELRHRVKTALKDVRHTAVRTQDLGAVRKSPWNDDQ
LSALDQYRQQLERNHVKHHHK

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 20982; Mature: 20982

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQLLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMYV
CCCCEEEEECHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
PGNSKSYRQADLEIIWTSKDQTADSYIEKYAGEKQSRVLQVTVATSDQAEQWVIFSEGAL
CCCCCCCEECCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCC
RVPALELRHRVKTALKDVRHTAVRTQDLGAVRKSPWNDDQLSALDQYRQQLERNHVKHHH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
K
C
>Mature Secondary Structure
MKQQLLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMYV
CCCCEEEEECHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
PGNSKSYRQADLEIIWTSKDQTADSYIEKYAGEKQSRVLQVTVATSDQAEQWVIFSEGAL
CCCCCCCEECCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCC
RVPALELRHRVKTALKDVRHTAVRTQDLGAVRKSPWNDDQLSALDQYRQQLERNHVKHHH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]