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The map label for this gene is petC [H]

Identifier: 28199646

GI number: 28199646

Start: 2066200

End: 2066961

Strand: Reverse

Name: petC [H]

Synonym: PD1775

Alternate gene names: 28199646

Gene position: 2066961-2066200 (Counterclockwise)

Preceding gene: 28199647

Following gene: 28199645

Centisome position: 82.03

GC content: 51.84

Gene sequence:

>762_bases
ATGGCTGATTGGGGCAGGTTACGGCGTTGTTTGTGTTGGATACTGTGCTTGTTGTTGCCATGTGTGCTGATGTCCGCTGC
ACAGGCGGTGGATGATGTCCCGTTGGAACATGCCGGTAATGATGTGAGTGATCGCATGTCGTTGCAGCGCGGTGTGCAGT
TGTACATGAATTATTGTGTGGGCTGCCATTCGTTGAAGTACCTACGTTATTCACGTATCGCTGCTGATTTGGGTTTAAGT
GAAGTGCAGGTGATGAGTACCCTCAATGTCACCGGTGCCAAGTTTGGCGATACGATCATGACAGGGATGCCGGTTGACAC
CTCCGAGCAGTGGTTTGGTAAGATTCCGCCGGATTTGAGTTTGGTGGCCCGCGTCCGTGGGAGTGATTGGATCTACACTT
ATCTGAGGTCTTTCTACGTCGACTCGACTCGCCCGCTGGGTTGGAACAATCGACTGTTTGTCGATGTTTCTATGCCCAAT
CCACTGTCGCATCTCCAGGGTGTGCAGCGGGCAGAATATGGTGGGGCGTCGCAGGCTGGTGCTGATCGGTTAGTGACTGG
GTTGGTTCTGGTCCAGCCAGGTCAGCAGAGCCCTGCTGAGTTTGACCAGACTCTGCGTGACATTGTCAATTTCTTGCAAT
ATGCCGCCGAGCCTGCGGCGTTACAACGGCATTCTTTGAGAGTATGGGTACTGTTGTTCCTAGTGTTGTTGACTTTCTTG
GTTTATCTACTTAAGAAGGCTTATTGGGAGGACGTGCATTGA

Upstream 100 bases:

>100_bases
GGGCGGGTGATGATTTTTTTGTATTTCGCATTTTTCATCACTATGCCATTGTGGACGGTAGTGGCTTCTATGAAGCCGGT
TCCAGAACGATTGACTTCCC

Downstream 100 bases:

>100_bases
TGGACGTGATATCGGTGGCTTGTATCTGCTATTGGTGTTTCTGATGGTTGATTGCAGAATCGCTGATTGTTATGGAGACC
TTCGGCATTGGGCCGGTGGT

Product: ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MADWGRLRRCLCWILCLLLPCVLMSAAQAVDDVPLEHAGNDVSDRMSLQRGVQLYMNYCVGCHSLKYLRYSRIAADLGLS
EVQVMSTLNVTGAKFGDTIMTGMPVDTSEQWFGKIPPDLSLVARVRGSDWIYTYLRSFYVDSTRPLGWNNRLFVDVSMPN
PLSHLQGVQRAEYGGASQAGADRLVTGLVLVQPGQQSPAEFDQTLRDIVNFLQYAAEPAALQRHSLRVWVLLFLVLLTFL
VYLLKKAYWEDVH

Sequences:

>Translated_253_residues
MADWGRLRRCLCWILCLLLPCVLMSAAQAVDDVPLEHAGNDVSDRMSLQRGVQLYMNYCVGCHSLKYLRYSRIAADLGLS
EVQVMSTLNVTGAKFGDTIMTGMPVDTSEQWFGKIPPDLSLVARVRGSDWIYTYLRSFYVDSTRPLGWNNRLFVDVSMPN
PLSHLQGVQRAEYGGASQAGADRLVTGLVLVQPGQQSPAEFDQTLRDIVNFLQYAAEPAALQRHSLRVWVLLFLVLLTFL
VYLLKKAYWEDVH
>Mature_252_residues
ADWGRLRRCLCWILCLLLPCVLMSAAQAVDDVPLEHAGNDVSDRMSLQRGVQLYMNYCVGCHSLKYLRYSRIAADLGLSE
VQVMSTLNVTGAKFGDTIMTGMPVDTSEQWFGKIPPDLSLVARVRGSDWIYTYLRSFYVDSTRPLGWNNRLFVDVSMPNP
LSHLQGVQRAEYGGASQAGADRLVTGLVLVQPGQQSPAEFDQTLRDIVNFLQYAAEPAALQRHSLRVWVLLFLVLLTFLV
YLLKKAYWEDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28506; Mature: 28375

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCC
>Mature Secondary Structure 
ADWGRLRRCLCWILCLLLPCVLMSAAQAVDDVPLEHAGNDVSDRMSLQRGVQLYMNYCV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHH
GCHSLKYLRYSRIAADLGLSEVQVMSTLNVTGAKFGDTIMTGMPVDTSEQWFGKIPPDLS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCCHHHCCCCCCCCHHHCCCCCCCHH
LVARVRGSDWIYTYLRSFYVDSTRPLGWNNRLFVDVSMPNPLSHLQGVQRAEYGGASQAG
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC
ADRLVTGLVLVQPGQQSPAEFDQTLRDIVNFLQYAAEPAALQRHSLRVWVLLFLVLLTFL
HHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VYLLKKAYWEDVH
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA